| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNE03020 |
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| Symbol | |
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| ID | 3257827 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006687 |
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| Strand | + |
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| Start bp | 857750 |
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| End bp | 859539 |
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| Gene Length | 1790 bp |
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| Protein Length | 438 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | 638256885 |
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| Product | endopeptidase, putative |
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| Protein accession | XP_570849 |
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| Protein GI | 58267386 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1222] ATP-dependent 26S proteasome regulatory subunit |
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| TIGRFAM ID | [TIGR01242] 26S proteasome subunit P45 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0528314 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATTTCCTCCT TTCCCTCAAA ACTCACCAAT CCTCTACACT CTAGCCAACA AGTAGTATTG
TACAATGGTA TGTTCAGGTT GTTACTGTCT GATGAGTGCT GACAGTTGAT CTTCCATAAG
GGTCAAGCAC CATCCAGCGG CGCTGGAAAC AATAAGAAAG GCAACTCCAA AGACAACAAA
GACAAGGTTG GTTCTTGTGT TTCGATGTAG CATCGCAAGA GATTGATTTG CTGACTTACT
TCGGTAGCCT AAGTGGGAGC CCCCTGTGCC TACTCGTATC GGTAAGAAGA AGAGACGCGG
ACCCGATGCG TCGTCCCGAC TTCCAGCTGT ATATCCCACC ACTCGATGCA AACTCAAGTT
ATTGAAGATG GAGAGGATAC AAGACTACCT TCTCATGGAA GAGGAATTTG TGTCTAATCA
GGCATCGCAG TCTGGTGAAG ATAGGACGGC GGCAGATCGA ACTCGGGTGG ACGAGCTTCG
TGGCTCGCCT ATGGGAGTCG GCACTTTGGA AGAGATCATT GATGACGATC ACGCCATTGT
GTCTTCCGGA GGTGGATCTG AATACTATGT TGGGATCATG TCCTTCGTTG ATAAGGACCT
GCTTGAACCC GGTTGCTCAG TTCTCCTTCA CCACAAGACG CACGCTGTTG TGGGAGTGCT
TGCCGATGAC ACCGATCCCA TGGTCTCTGT CATGAAACTT GATAAAGCCC CCACTGAAAG
CTATGCTGAT ATTGGAGGCC TGGAAAGTCA AATTCAAGAA ATCAAAGAGT CAGTTGAACT
TCCACTTACA CACCCCGAAC TTTATGAAGA GATGGGCATC AGACCGCCCA AAGGTGTTAT
CTTGTATGGA GTACCTGGTA CTGGAAAGAC TCTTCTTGCA AAAGCCGTCG CCAATCAGAC
ATCTGCAACA TTTCTTCGTA TAGTCGGCTC CGAACTCATT CAAAAGTATC TTGGCGATGG
TCCAAAGCTT GTTCGGGAAC TATTCAGGGT GGCTGAGGAA AACGCCCCAA GCATCGTCTT
CATCGATGAG ATTGATGCCA TCGGGACAAA AAGATATGAC TCGACATCCA GTGGCGAACG
GGAGATACAG CGTACAATGC TGGAGCTGTT AAATCAGCTG GACGGTTTTG ATACGCGGGG
TGATGTTAAA GTCATAATGG CAACCAACAA GGTGAGTCAT CTTCGCTTAC AAGATTTTAA
CCCGCGTTGT TGACTAGTTT TTAGATTGAA AATCTCGACC CTGCGCTGAT TCGTCCAGGT
CGAATAGACA GGAAAATTGG CAAGTTTGCC CATAGCCATA GCTTACCTCG TGCTGACTTA
GATTCTCATC AGAATTCCCT CTTCCTGATA CAAAGACTAA GAGACACATC TTTAAATTAC
ACACATCGCG AATGTCTTTG GCAGATGATG TGGACATCGA GGAATTAGTC ATGACCAAGG
ATGAACTATC TGGGGCAGAC ATTAAAGCCG TTTGCAGTGA GTGTTTCATG TCGTGACCAT
CGCTGACAAT TAGCCGAGGC CGGTTTGCTG GCATTGAGGG AAAGGCGAAT GAGGGTTACT
CGTACCGTAG GTTCATGTCT AAATATAGGA CATCTGTTGC TGTTGCTGAT TTTTGGGGGA
TACCAGGATT TCACCACAGC ACGAGAAAAA GTCCTGTATG GAAAAGACGA GAATACTGTA
AGTCTATCTG CCTTTAACAC CGCTGACGCT GTAGCCCGCA GGCCTGTATC TCTAAGCGTA
CGGAGACTGG AGATTTTGGT TTATGTAGTA GACTGCATGC ACTTCAATCA
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| Protein sequence | MGQAPSSGAG NNKKGNSKDN KDKPKWEPPV PTRIGKKKRR GPDASSRLPA VYPTTRCKLK
LLKMERIQDY LLMEEEFVSN QASQSGEDRT AADRTRVDEL RGSPMGVGTL EEIIDDDHAI
VSSGGGSEYY VGIMSFVDKD LLEPGCSVLL HHKTHAVVGV LADDTDPMVS VMKLDKAPTE
SYADIGGLES QIQEIKESVE LPLTHPELYE EMGIRPPKGV ILYGVPGTGK TLLAKAVANQ
TSATFLRIVG SELIQKYLGD GPKLVRELFR VAEENAPSIV FIDEIDAIGT KRYDSTSSGE
REIQRTMLEL LNQLDGFDTR GDVKVIMATN KIENLDPALI RPGRIDRKIE FPLPDTKTKR
HIFKLHTSRM SLADDVDIEE LVMTKDELSG ADIKAVCTEA GLLALRERRM RVTRTDFTTA
REKVLYGKDE NTPAGLYL
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