Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNE02620 |
Symbol | |
ID | 3257875 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006687 |
Strand | + |
Start bp | 703179 |
End bp | 705530 |
Gene Length | 2352 bp |
Protein Length | 504 aa |
Translation table | |
GC content | 47% |
IMG OID | 638256852 |
Product | branched-chain alpha-keto acid dehydrogenase E1-alpha subunit, putative |
Protein accession | XP_570965 |
Protein GI | 58267618 |
COG category | [C] Energy production and conversion |
COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.816095 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CACTTTTCGA AGTGAACCAT TGACCAAGAA ACACTATCAG ATGAGGACAG CTTTACAAGC CGTGACGAGC TACAGCCGGC TACCACTTGC TGCCAATGCT TCAAGAAGGT CATTGGTAGG TACCATATTG ACATTATAGG CTAACAGCGC GGCAAAGATT ACTGGACCTC CGCCCAATAT CCCACCAATT CACAATACTA CGTCAACTTC AGCTCCCCTC CCGCTTCCAA CCCCGCTGCC TTCCTTTTCG CCTCCTTCGA TTCAAGATGC CAAGCCACTT TACGTACCAG GAAGTCAAGC AGAGAGGCAG GCAAGGGCTG GAAGGATGAG CAGACCTTTG AGACGGGGCA CCCACGAAAG TTGGTGGTCT GCAGAAATGG GATGGTTCAA TGCTGTGGCC AAGGTAGGCC CTCACCACTA CCCAAGCAAG CTTTGATATG GGGACTTATG ATCCTATTAT TAGACTATCC CCACCTTCCG TGTGTTGGAT GAAGAGGGCC ATATGGTCAA GGATGGTCAT GAATCACAGG TATGGATGTG GTCATATTGC AGTGCTTTTC GCTTGTCTAA TCCCTTCGCA GGCAACAAAA GAACAGACAC TTTCCATGTG TGTGTGTCCC ATTTTACAAT GATAATGGCT CATTTTATGG TTTTTAAGCT ATCGCACAAT GACTCTCATA CCAATAGTGG ACAATGTCCT TTACCAATCT CAACGCCAGG GCCGTATTTC CTTTTATATG CAGTGTGCAG GCGAAGAAGC TGCCATCGTT GGTAGTGCCG CTGCCATGCT CGCGAACGAT GAGATTTTTG GCCAATATGT AAGTGCTTAT ACTGTGAGGA AACACAATGC TAATTCGAAA CAATGTGTCC CATATAACAG AGAGAGTCTG CCGCTCTACT GCATAGAGGC TTTACCCTTG ACGCTCTCAT GGCGCAATGT TTTGGCAATG TAGACGACAA AGGCACCAAA GGCAGAATGA TGCCTGTTCA TTACTCTTCC CCTGAGCATG GTTTCCACAC TATCACAAGT CCACTCGCCA CTCAGTGAGT CAGTTTGCTT CATGAGCTTT GCTCTCAGCT GAAGAATGTA GGATGCCTCA AGCCGCGGGA GCGGCCTATA TGTTGAAACT CGACGAAGAG AGACAAGGGG ATTGTGTAAT ATGCTATTTC GGTGACGGTG AGTTAAAACT TGGCCACTGA TTATGCGCAT ACGTCAACAG TCTCATTTTA TATCTTAGGT GCGGCCAGTG AAGGAGATTT TCATGCGGCT CTAGGAATGA ACTCTGTCTT GGGCGGACCT TGCATCTGGT TCTGTCGTAA TAATGGGTGA GATTTGGCTT CACCCACCGT CAGCACACCC GGGAGTTTAA CCACAAACAC CAAACTTACT TAGGTTTGCT ATCTCAACCC CCATTATTGA CCAATATGCC GGTGACGGAA TTGCCTCCCG TGGACCAGCA TACGGCCTCG ACACTATCCG AGTAGATGGT AATGATGCAC TGGCCGTCTA CGCTGCGGTC TGTGAAGCTA GAAAGCGAGC GGTAGAAGGG AAGAAGGGGG TGTTGGTAGA GGCCATGACT TACCGAGTAG GGCATCACTC AACAAGCGAT GATTCGAGCA TGTACAGGGC AATCGAAGAG GTAAAGGAAT GGTCGGTTGT AGGTGCGTAC TACCATACCA CTAACTGCAG TAGCATTCAA TTGACGTTGT TATCAACAAT TTGCAGACAA CCCGATACAT AGGCTCCGAT CTTACTTGGT TTCTAAAAAG TGGTGGTCCG AAGAGGAGGA GAAAGCACTT CTAAAGAAGA ACAAGGCAGA CGTTTTGAAA GCTTTCAGTA GAGCCGAAAA GCTGCCCAAG CCAAAGCTCG GAGAGATGTT CAATGACGTT TGGGGCGTCG CTCCAGGAGA AGAAGTACCT GCTGTCATTG TAAGTCACCT TATTCTACAA ACCTTTTTTT TTTTTTTTTT TTTTTGGTTA CATCGTAAGC TTATGACTGC TTCAGATGGA GCAAAGGGCA GAACTTGGAA GGCTATTGAA GAAGTATGGG GAAGTCTGGC CTCCTTGGAA GAAAGAACTC AAGAAATTCG TCGAACAAGG GGAAGACGTC ATGGACTGTG ACGGGAAAGG CGCATAGATT GCTGTAAATC CCAGTATGAT AGAGTCCAAA TGAGCGAGGG GCGAAAGGGA GATGAAGCGA GGACAGATAC TTGTTATCTA CGATTTAGCT ACACCCCGCC ACTATTCTGA GCAGGTAATG AATAGCAGCA TACCATTGTA CGTGTGCCTC GCCATTGCAG TATACATCAT TTAGCTGTTG TATGTACTGT GAGTTTATCA TGCAGTACAA AT
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Protein sequence | MRTALQAVTS YSRLPLAANA SRRSLITGPP PNIPPIHNTT STSAPLPLPT PLPSFSPPSI QDAKPLYVPG SQAERQARAG RMSRPLRRGT HESWWSAEMG WFNAVAKTIP TFRVLDEEGH MVKDGHESQA TKEQTLSIYR TMTLIPIVDN VLYQSQRQGR ISFYMQCAGE EAAIVGSAAA MLANDEIFGQ YRESAALLHR GFTLDALMAQ CFGNVDDKGT KGRMMPVHYS SPEHGFHTIT SPLATQMPQA AGAAYMLKLD EERQGDCVIC YFGDGAASEG DFHAALGMNS VLGGPCIWFC RNNGFAISTP IIDQYAGDGI ASRGPAYGLD TIRVDGNDAL AVYAAVCEAR KRAVEGKKGV LVEAMTYRVG HHSTSDDSSM YRAIEEVKEW SVVDNPIHRL RSYLVSKKWW SEEEEKALLK KNKADVLKAF SRAEKLPKPK LGEMFNDVWG VAPGEEVPAV IMEQRAELGR LLKKYGEVWP PWKKELKKFV EQGEDVMDCD GKGA
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