Gene CNE02090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNE02090 
Symbol 
ID3257524 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006687 
Strand
Start bp567198 
End bp568736 
Gene Length1539 bp 
Protein Length204 aa 
Translation table 
GC content52% 
IMG OID638256801 
ProductDNA-binding protein hexbp, putative 
Protein accessionXP_570872 
Protein GI58267432 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5082] Arginine methyltransferase-interacting protein, contains RING Zn-finger 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.229272 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCATCATCAA CTTTGATCTT TGATCATATT CAGCGAGTTT AATCAATCTC TTAATCTCAA 
CGCAGCAAAA ATGTTCGGTG CTCCTCGAGG AAGCTCTTGT TTCAAGTGTG GTCAGCGTGG
GTAGCGGGTT TCTTTTGGGT GTGCGTTGTG TGTGTGTGGT GTGGTGCAGC TTGACGATGC
TTTCTGGGCA GCGTGGTTTG CGCTAGTCGT GACTGCTGTG TCATCTGTTG TGTGCGGGGG
AGTGGCGAGT GTCGAGTCTA GTCGGACGAC GATGACGAGC AGCAAAAACT TCAACAACTC
CCTCGTACAT AGCTATAGCA TTACCCTTAT GTTTGCCGTT TGGTGGGCTG GGTGCATTGT
ATGCCATCAT CATTTTTTGC CACACTTTCA ATTCGGTTTG CCATTACATA TGTGACAGAC
GCTTGAAATT GCCGCGTGCT ACCCACCACA CCTTTGATAC AAACTGACAC ATGCACACCC
CACTTCTTGT TAAATGGGAT GTTTGCTCAC CTGTTTTGTT CACAGAGGGC CACGTCGCCG
CCGCTTGCCC TGCGGAGGCT CCTACCTGCT ACAACTGCGG TCGTGAATAT AGCTTTTCCT
TTAGTATGGT CCGTTTGCTC ATTTAAGACT AGTCTCTGGC CACTTGAGCC GTGAATGTCC
TCAGCCCAAG AACAAGGCTT GTTACACTTG CGGTCAGGAA GGTCACCTTT CTTCTGCCTG
CCCTCAAGGT TCTGGTGCCG GTGGTTTCGG CGGTGCCTCT GGCGGTGGTG AGTGCTACCG
ATGCGGTAAG CCCGGTCACA TTGTGAGTGC AGCTTGAGAA TTAGCTTGTA AATGTGCTAA
ATGAACATAA GGCCCGAATG TGCCCCGAGT CTGGTGACGC TGCTGCCGGT GGTTTCGGCG
GTGCTGGTGG TTACGGTGGT TTCGGTGGTG GTGCCGGTTT CGGTAACAAA TCTTGCTACG
TAAGTTCATC AGCCTTCATT CAGACTATGC TGTTGCTAAC AAGATGCTTT AGACTTGCGG
TGGTGTCGGC CATATCTCCA GGGAGTGCCC CTCTGGTGCT TCTCGCGGTT TCGGTGGTGG
TGGTGGTGGC TTCGGTGGCC CCCGAAAGTG CTACGTGAGT GTTTTTTTTT TCTTTCCCCG
CGCGTAATTC TATGAAGGAG GTGAATCTGA CTTCTCTACT CAGAACTGTG GTCAGGACGG
TCACATCTCT AGGGAGTGCC CTCAGGAGCA GGGCAAGACC TGTTACTCTT GCGGCCAGCC
CGGTCACATC GCCTCTGCCT GCCCTGGCGC TGGCGCTGAG GCCCCTGCTG CCTAAGCCGT
CGTGGTTGGA TTGTAAACGA CGATATGTAG TGATGGAGAG TAGGGCGCGG CGTAGGCGAG
GTAGCGAAAG CGAAGCGGTT GCGTAACGGA AATATCTCAT CTCCCACTTT TCTTTGCTCA
TTGGCGTTTA TATATCATTC ATGGTCTCTC ATTCGTTGTC TTAGGTATCA AAATCTCCAA
ATCGTTGCTC ATGCGATGTA TCAATCATGG CATTTCGTT
 
Protein sequence
MFGAPRGSSC FKCGQQGHVA AACPAEAPTC YNCGLSGHLS RECPQPKNKA CYTCGQEGHL 
SSACPQGSGA GGFGGASGGG ECYRCGKPGH IARMCPESGD AAAGGFGGAG GYGGFGGGAG
FGNKSCYTCG GVGHISRECP SGASRGFGGG GGGFGGPRKC YNCGQDGHIS RECPQEQGKT
CYSCGQPGHI ASACPGAGAE APAA