Gene CND02520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCND02520 
Symbol 
ID3257258 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006686 
Strand
Start bp688226 
End bp691231 
Gene Length3006 bp 
Protein Length738 aa 
Translation table 
GC content48% 
IMG OID638256186 
Productlanosterol synthase, putative 
Protein accessionXP_570450 
Protein GI58266588 
COG category[I] Lipid transport and metabolism 
COG ID[COG1657] Squalene cyclase 
TIGRFAM ID[TIGR01787] squalene/oxidosqualene cyclases 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.179646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GGGATGCCAA CAATAACCAA CACATTCATT TCTTTCCCAC CTTTCACCGA TACATTCATG 
GCCCAGTACA CACCCCCAGC AACTGACCTC ACAGCATGGA GGCTCAAGGT ATCCGAAGAC
TCGCATGGCC AACAGAAGTG GGTGTACCTC TCTGATCCTG CGCAGAGGAA GGAATGGCCC
CAGATGAACA TTGAAAAGTA CTGGCTTGGC TTGGATGTGG TGCGTCTTAT TTTCATATCC
TCCATCCCGG AATCGCAAGC TGACAACACC ATATAGGAGG TGCCCGAGTT AGAAGAACCA
AAGACACCCC TTGACGCGGC ACGTAACGGC TACAGGTTCT ACAAGGAGCT TCAAAGCGAG
GATGGTCATT TCTCTACAGA GTATGGAGGT TAGTTCAAAT GTTATTGAAT ATCCACTATG
TACTGACACC CGACAAAGGT CCACTATTCC TCATACCTGG GTTGATCATC GCCCTCTACG
TTACTGGCCA GTCATTGCGC CACGAACAAG CCATTGAGAT GCGCCGCTAT TTATTTAACA
AAAGGAGAAA GGAAGGTGGC TGGGGATTGT GAGCTTTTGA TTGAGTTTCG GATTGAAAAT
GAGACTAATA TAATATGACA GGCATACTGC TGCACCGCCC ACCGTATATG GAACCGTGAT
GAACTATGTC GCGCTGCGAA TGCTGGGTAT GGGCCCTGAT GAAGGACCGA TGACGGAGAT
CCGATCGTTA ATACATAAGA TGGGCGAGTT GCTACCATTC ACACTGCCTG GCCTGCGGCT
GATTATCTAT TAGGAGGGGC AACCGGCATT CCTACGTGGG GCAAGGTCTG GTTGAGTATT
TTGGGAGCGT ACGAGTGGGA CGGCGTGGGG TCGGTGCCTC CCGAGTTATG GTTGCTGCCT
GATTGGGCAC CATTCGCTCC TTGGAGATGG GTAAGTGTGG CTTGCAAAGA CATCACGGGA
CACTAACGAG CAAACGGTGC GCAGTGGATT CATGTTCGAC AGGTTTGTGA GTGCCTGTGC
ACAACAAGTA TTTGTGGCTG AATGTATTTT AGTCACCCCT ATGAGCTTCC TGTATGGTAC
TCGGTTTGTT GGTCCCTTTA CTCCTCTTGT TTTCAGTCTT CGTCAGGTGC ACTCATTTTG
CAACTTTTCA TGAGTGGAGC TCAGCTTACT ACAATGCTCA GGAACTCTAT GTCGAGCCGT
ATGAGACCAT CAACTGGCCA TCTCAACGAT CCAACATATC ATCTTATGAT ATTTACTCTC
CTCATCACCC CATCCTTGAC ATGGCTCATC AGCTCCTGGC GGTTTATGAA AAACTACCAC
ATGTACCCAT TCTCTCTTCT AGGCTCCCCC TACGCAAAGT CGCTCTGGAC AAGGTTTATC
GAATGATCAC TTATGAAGAC GAGAACACAA CCTACCAGAC TGTTGGTCCG GTCTCAAAAG
CCTTTCACAT CGTTTGTCGC TTTGCCCGTG AAGGTCCCAA CAGTGAGGCG TTTAAATCCC
ACCTTTCCAG GATTGACGAC TTTTTGTGGC TAAGCAAGAG TGGTCTGATG ATGATGGGCA
CCAATGGTTC ACAGATGTGG GATACGGGAT TTATGGCTCA GGCCGCCGTG GAAACTGGGT
TAGCAGAGGA GTCCGAGTTC AAAGAAAGTG TAAAGGGGAT GCTGGACTGG TTGGACAAGG
CGCAGATGAG AGAGAATCCA AAGTGGTACA AAGAGGGTTA TCGACACCGC ACCAAGGGTG
CTTGGCCATT CTCCACTCCC GAGCAAAGTT ATACAGTCAG CGACTGTACA GCTGAGGGAC
TCAAGGCTGT GCTGGCCCTT CAGCACCTGG ATTATACGCC AAAGCCTGTC GGGCTGGATA
GGATGCGTGA CGCGGTTGAC ACTCTGTTAT CGATGCAGAA CAAAAGCGGT GGTTTTGCAA
GCTATGAGTT GACCAGAGGC AGTACCAAGT TGGAGTGGTT AAATGCAGCT GAAGTCTTCG
GTGAGTAGGC AAATGTGATA AACGAACGAA CAACTCCCAT GTACGGGTGC TAACAATGCT
ATAGGAGACA TCATGATAGA TTATACGTAC CCGGAGTAAG TTCATTTGTC CTTGGTGCCT
TCCTCCCGTC AGACATGTCT AATTGCTTTT AGGTGCACGA CCTCTGTATT ATCGGCCTTG
AAATACTTTT CTAAAGTTGA TACAGAGTAT CGAGCAGCGG ATATTGAGTA AATGAGTTTG
CTTCGCATAT GTATGATGCG CTGACTAGCT CCTACAGACT TACGATACGC AGAGCCATTC
AATACATTCA CGATATCCAA CGTCCCGACG GTTCGTGGTA TGGTTCATGG TAAGATATAA
ACACTGGTGG TGGGTATGGT ATTAATGCAT GACTATAAAT AGGGGTATTT GTTTCACCTA
TGCCACTATG TTTGCACTTG AATCCCTTGG CATAGCGGGT GAGACCTGCG CCAACTCGGA
CAAGGTGAGA CGAGCTTGTG ACTTTTTGGT TGGACACCAG ATGGAAGATG GTGGATGGGG
TGAAACTTAC ATGGTGAGTT GTTCCAATTT GTCTGTCGGC ATCCGGTTGA GTATCGCGCA
GTCGTGCGTA ACTGGCAAAT ACGCCCAACA TGACCAGTCC CAGGTGGTCC AAACGGCATG
GGCCATTCTT GCTCTCATCT ATGGACAATA TCGCGACAAA ACTGTTATTG AACGCGCTGC
GAAACTTATA ATGAGCCGAC AATTGAAGGA TGGTAGATGG GAACAGGAGG ATACCGAGGG
TATATTCAAC AAGAACTGTG CCATAGATTA TCCTGGTGAG CTGACAAGAA ATCCCACTTG
GCATTGGGGC TTATCCGATT ATGTAGCGTT CAAATTCGTG TTCTGTATCT GGGCGTTGGG
GAGGGCGGAC AAATATTTGA GGTCATAGAG ATTGAGGATG GCAGGGGGGA GTATAAGATG
TCATTCTGTC CGTATGTATG AAACCAGCCT TATAGAGTAG TTTGCACGGA GGATTATTGA
GGGACA
 
Protein sequence
MPTITNTFIS FPPFTDTFMA QYTPPATDLT AWRLKVSEDS HGQQKWVYLS DPAQRKEWPQ 
MNIEKYWLGL DVEVPELEEP KTPLDAARNG YRFYKELQSE DGHFSTEYGG PLFLIPGLII
ALYVTGQSLR HEQAIEMRRY LFNKRRKEGG WGLHTAAPPT VYGTVMNYVA LRMLGMGPDE
GPMTEIRSLI HKMGGATGIP TWGKVWLSIL GAYEWDGVGS VPPELWLLPD WAPFAPWRWW
IHVRQVFTPM SFLYGTRFVG PFTPLVFSLR QELYVEPYET INWPSQRSNI SSYDIYSPHH
PILDMAHQLL AVYEKLPHVP ILSSRLPLRK VALDKVYRMI TYEDENTTYQ TVGPVSKAFH
IVCRFAREGP NSEAFKSHLS RIDDFLWLSK SGLMMMGTNG SQMWDTGFMA QAAVETGLAE
ESEFKESVKG MLDWLDKAQM RENPKWYKEG YRHRTKGAWP FSTPEQSYTV SDCTAEGLKA
VLALQHLDYT PKPVGLDRMR DAVDTLLSMQ NKSGGFASYE LTRGSTKLEW LNAAEVFGDI
MIDYTYPECT TSVLSALKYF SKVDTEYRAA DIELTIRRAI QYIHDIQRPD GSWYGSWGIC
FTYATMFALE SLGIAGETCA NSDKVRRACD FLVGHQMEDG GWGETYMSCV TGKYAQHDQS
QVVQTAWAIL ALIYGQYRDK TVIERAAKLI MSRQLKDGRW EQEDTEGIFN KNCAIDYPAF
KFVFCIWALG RADKYLRS