Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CND02520 |
Symbol | |
ID | 3257258 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006686 |
Strand | + |
Start bp | 688226 |
End bp | 691231 |
Gene Length | 3006 bp |
Protein Length | 738 aa |
Translation table | |
GC content | 48% |
IMG OID | 638256186 |
Product | lanosterol synthase, putative |
Protein accession | XP_570450 |
Protein GI | 58266588 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1657] Squalene cyclase |
TIGRFAM ID | [TIGR01787] squalene/oxidosqualene cyclases |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.179646 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GGGATGCCAA CAATAACCAA CACATTCATT TCTTTCCCAC CTTTCACCGA TACATTCATG GCCCAGTACA CACCCCCAGC AACTGACCTC ACAGCATGGA GGCTCAAGGT ATCCGAAGAC TCGCATGGCC AACAGAAGTG GGTGTACCTC TCTGATCCTG CGCAGAGGAA GGAATGGCCC CAGATGAACA TTGAAAAGTA CTGGCTTGGC TTGGATGTGG TGCGTCTTAT TTTCATATCC TCCATCCCGG AATCGCAAGC TGACAACACC ATATAGGAGG TGCCCGAGTT AGAAGAACCA AAGACACCCC TTGACGCGGC ACGTAACGGC TACAGGTTCT ACAAGGAGCT TCAAAGCGAG GATGGTCATT TCTCTACAGA GTATGGAGGT TAGTTCAAAT GTTATTGAAT ATCCACTATG TACTGACACC CGACAAAGGT CCACTATTCC TCATACCTGG GTTGATCATC GCCCTCTACG TTACTGGCCA GTCATTGCGC CACGAACAAG CCATTGAGAT GCGCCGCTAT TTATTTAACA AAAGGAGAAA GGAAGGTGGC TGGGGATTGT GAGCTTTTGA TTGAGTTTCG GATTGAAAAT GAGACTAATA TAATATGACA GGCATACTGC TGCACCGCCC ACCGTATATG GAACCGTGAT GAACTATGTC GCGCTGCGAA TGCTGGGTAT GGGCCCTGAT GAAGGACCGA TGACGGAGAT CCGATCGTTA ATACATAAGA TGGGCGAGTT GCTACCATTC ACACTGCCTG GCCTGCGGCT GATTATCTAT TAGGAGGGGC AACCGGCATT CCTACGTGGG GCAAGGTCTG GTTGAGTATT TTGGGAGCGT ACGAGTGGGA CGGCGTGGGG TCGGTGCCTC CCGAGTTATG GTTGCTGCCT GATTGGGCAC CATTCGCTCC TTGGAGATGG GTAAGTGTGG CTTGCAAAGA CATCACGGGA CACTAACGAG CAAACGGTGC GCAGTGGATT CATGTTCGAC AGGTTTGTGA GTGCCTGTGC ACAACAAGTA TTTGTGGCTG AATGTATTTT AGTCACCCCT ATGAGCTTCC TGTATGGTAC TCGGTTTGTT GGTCCCTTTA CTCCTCTTGT TTTCAGTCTT CGTCAGGTGC ACTCATTTTG CAACTTTTCA TGAGTGGAGC TCAGCTTACT ACAATGCTCA GGAACTCTAT GTCGAGCCGT ATGAGACCAT CAACTGGCCA TCTCAACGAT CCAACATATC ATCTTATGAT ATTTACTCTC CTCATCACCC CATCCTTGAC ATGGCTCATC AGCTCCTGGC GGTTTATGAA AAACTACCAC ATGTACCCAT TCTCTCTTCT AGGCTCCCCC TACGCAAAGT CGCTCTGGAC AAGGTTTATC GAATGATCAC TTATGAAGAC GAGAACACAA CCTACCAGAC TGTTGGTCCG GTCTCAAAAG CCTTTCACAT CGTTTGTCGC TTTGCCCGTG AAGGTCCCAA CAGTGAGGCG TTTAAATCCC ACCTTTCCAG GATTGACGAC TTTTTGTGGC TAAGCAAGAG TGGTCTGATG ATGATGGGCA CCAATGGTTC ACAGATGTGG GATACGGGAT TTATGGCTCA GGCCGCCGTG GAAACTGGGT TAGCAGAGGA GTCCGAGTTC AAAGAAAGTG TAAAGGGGAT GCTGGACTGG TTGGACAAGG CGCAGATGAG AGAGAATCCA AAGTGGTACA AAGAGGGTTA TCGACACCGC ACCAAGGGTG CTTGGCCATT CTCCACTCCC GAGCAAAGTT ATACAGTCAG CGACTGTACA GCTGAGGGAC TCAAGGCTGT GCTGGCCCTT CAGCACCTGG ATTATACGCC AAAGCCTGTC GGGCTGGATA GGATGCGTGA CGCGGTTGAC ACTCTGTTAT CGATGCAGAA CAAAAGCGGT GGTTTTGCAA GCTATGAGTT GACCAGAGGC AGTACCAAGT TGGAGTGGTT AAATGCAGCT GAAGTCTTCG GTGAGTAGGC AAATGTGATA AACGAACGAA CAACTCCCAT GTACGGGTGC TAACAATGCT ATAGGAGACA TCATGATAGA TTATACGTAC CCGGAGTAAG TTCATTTGTC CTTGGTGCCT TCCTCCCGTC AGACATGTCT AATTGCTTTT AGGTGCACGA CCTCTGTATT ATCGGCCTTG AAATACTTTT CTAAAGTTGA TACAGAGTAT CGAGCAGCGG ATATTGAGTA AATGAGTTTG CTTCGCATAT GTATGATGCG CTGACTAGCT CCTACAGACT TACGATACGC AGAGCCATTC AATACATTCA CGATATCCAA CGTCCCGACG GTTCGTGGTA TGGTTCATGG TAAGATATAA ACACTGGTGG TGGGTATGGT ATTAATGCAT GACTATAAAT AGGGGTATTT GTTTCACCTA TGCCACTATG TTTGCACTTG AATCCCTTGG CATAGCGGGT GAGACCTGCG CCAACTCGGA CAAGGTGAGA CGAGCTTGTG ACTTTTTGGT TGGACACCAG ATGGAAGATG GTGGATGGGG TGAAACTTAC ATGGTGAGTT GTTCCAATTT GTCTGTCGGC ATCCGGTTGA GTATCGCGCA GTCGTGCGTA ACTGGCAAAT ACGCCCAACA TGACCAGTCC CAGGTGGTCC AAACGGCATG GGCCATTCTT GCTCTCATCT ATGGACAATA TCGCGACAAA ACTGTTATTG AACGCGCTGC GAAACTTATA ATGAGCCGAC AATTGAAGGA TGGTAGATGG GAACAGGAGG ATACCGAGGG TATATTCAAC AAGAACTGTG CCATAGATTA TCCTGGTGAG CTGACAAGAA ATCCCACTTG GCATTGGGGC TTATCCGATT ATGTAGCGTT CAAATTCGTG TTCTGTATCT GGGCGTTGGG GAGGGCGGAC AAATATTTGA GGTCATAGAG ATTGAGGATG GCAGGGGGGA GTATAAGATG TCATTCTGTC CGTATGTATG AAACCAGCCT TATAGAGTAG TTTGCACGGA GGATTATTGA GGGACA
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Protein sequence | MPTITNTFIS FPPFTDTFMA QYTPPATDLT AWRLKVSEDS HGQQKWVYLS DPAQRKEWPQ MNIEKYWLGL DVEVPELEEP KTPLDAARNG YRFYKELQSE DGHFSTEYGG PLFLIPGLII ALYVTGQSLR HEQAIEMRRY LFNKRRKEGG WGLHTAAPPT VYGTVMNYVA LRMLGMGPDE GPMTEIRSLI HKMGGATGIP TWGKVWLSIL GAYEWDGVGS VPPELWLLPD WAPFAPWRWW IHVRQVFTPM SFLYGTRFVG PFTPLVFSLR QELYVEPYET INWPSQRSNI SSYDIYSPHH PILDMAHQLL AVYEKLPHVP ILSSRLPLRK VALDKVYRMI TYEDENTTYQ TVGPVSKAFH IVCRFAREGP NSEAFKSHLS RIDDFLWLSK SGLMMMGTNG SQMWDTGFMA QAAVETGLAE ESEFKESVKG MLDWLDKAQM RENPKWYKEG YRHRTKGAWP FSTPEQSYTV SDCTAEGLKA VLALQHLDYT PKPVGLDRMR DAVDTLLSMQ NKSGGFASYE LTRGSTKLEW LNAAEVFGDI MIDYTYPECT TSVLSALKYF SKVDTEYRAA DIELTIRRAI QYIHDIQRPD GSWYGSWGIC FTYATMFALE SLGIAGETCA NSDKVRRACD FLVGHQMEDG GWGETYMSCV TGKYAQHDQS QVVQTAWAIL ALIYGQYRDK TVIERAAKLI MSRQLKDGRW EQEDTEGIFN KNCAIDYPAF KFVFCIWALG RADKYLRS
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