Gene CND00070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCND00070 
Symbol 
ID3257274 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006686 
Strand
Start bp18556 
End bp20874 
Gene Length2319 bp 
Protein Length590 aa 
Translation table 
GC content48% 
IMG OID638255945 
Productmyo-inositol transporter, putative 
Protein accessionXP_570359 
Protein GI58266406 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00879] MFS transporter, sugar porter (SP) family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCAA CTCACATCGA AAACCGTGAT GATAACTTTC TAGAAAATAA GCATTTTGAT 
CACACTGAGA GACTCGAAAA TATCAAAGGC TGGCAAGAAC CGCCTAGTCC CTCTGGCTTT
GGTGGTCATT TGATTGTAAG TTTATTTTTC GCATAGTTGC GTAAAATAGG TGTTGACGCC
TATTTGCTAG GATGAAAATC TTGTGCGAGT AGAAGGTGAA GATAAAGTAA CATGGTATCT
TTGCTTTTTA ATTTCTGCTG TATGTGTATC ATCCCTCTCT TATTACTGTA AAAGGGACAT
TAATTGACTC CCAATAGTCG GCCATCGCTG GTTTCCTATT CGGCTATGAC ACTGGCGTAG
TTGGTGTTGC ATTGCCTTTG GTGGGAACCG ACCTGGGTGG TAGCGCACTC AACTCTTCAC
AGCAAGAGAT TATCACAGCA GGTACCACCA TTGGGGCTAT CTTTGGTTCT GCTATTCTTG
GTGGATGGGG TGATCGCCTT GGACGAAAGA AGGCAATCTT GATCTCTGAC GTCTTGTAAG
TCATCTTTGG ACAATGCTAT ACACTCCGAC TTACATTATT TATAAAGCTT TACCATCGGT
GCCGTGATCA TTGCATCCAG TTACTCTGTC CCGCAAATCA TTGTCGGTCG AATTGTCCTC
GGTATTGGAG TCGGTGGCGC AGCTGTGATT GCTCCTCTTT TCATCACTGA GACAGCGCCG
ACCGCTGTCC GTGGTCGATG CATTGGTATT AAGTGAGCTC TATACCTATA TATATCAGTG
GACTTCAGCT GATATAGAAC ACAGTGCCTT CTTTATTCCC TTTGGTCAGG TTGTTTCCGA
CGCCATCGGG GCTGGTGTAC AGAACATGCA CAATGGGTGG CGACTACTTT GTAAGTGAGG
CGACACACAC CTACTTAGTG ATCCGCTAAC TTACCACCAG TCGCTCTTGG TGCTGTCCCT
TCCCTTCTTC AACTGCTTCT TTTCCATTAC CTTCCCGAGT CACCACGTAT CCTTATTCTC
AAGGGGGATA CCGAAGGCGC TCGGACTGTC TTCCAGCGCA TTTACCCCAC CGCCACTAGT
GAGATGATTG AATACAAGTT CCGCGTTGCT CAAGAATACG TCGCCGCCAC AACCGCCCTT
CAGTCTGGGA CCACTTTCTG GGAAAGAGCG AAGAAAGTAT GGAGAACTGG ATCGTATCGA
AGATCTATCA TTGCTGTCAG TGTTCTTCAG GCTGCCGGTC AGCTCTGTGG TTTCAACACC
CTCCTTTATT ATGCCGGTAC TCTTTTCAGT CTCCTTGGAC TGTCAAATCC AGCCTTAGGT
GGTCTTATCC CTGCCGGCAC CAACGCCGTC TTTTTGTTGA TTGGAATGAC TACCGTTGAC
AAAATCGGAA GACGAGGGTT GTTGTTGATT GGCGTGCCAA TCATGGTACG TTTCAACTGC
TCTGACATTG GTATTCGATG TGTAACTCAT ATCACTTTAG CTCCTTGGTC ATGTGTGGAA
CATCGTTGCT TTCTATTGTG AGTAGCCCTA TTTTGATTGA CCTATCCCTC CACCTAATCC
TCGTGTGCAG ACTTGTGCAA GCCGACTGGA GGATTCCTCG ATACGTCTTA CACCTACGAT
ACGACAAACG TCGGTATTGT CATTGGTGGT ATCGTCTTCT TCGTCGCCGG TTTCGGTCTT
ACCTACAGTC ATCTCGTCTG GTACCAGGCT GAGTATTTGG CCCTCGAAGT ACGATCCATG
GGGTCTGGTA TCGCCACCAC CATCTGTTGG ATTGCGAATC TTGTTGTCTC TGTTTCCTAC
CTTTCAGAAC TCGAAACGAT GACCCCTTCT GGTACCTACG GCTTCTATTT CGGTATCAGT
GTAGTCGCCT TCGTGTTCGT GGTGTTCTGC TTCCCAGAAA CCAGTAAGTA TCCTCAACAA
CCTTATCTTT TTAGCCGAAT GCTGATAATC TCACCTTCCC AACGAAAGAA CAACTGTCAA
TCGACGAGAC ATCTCTTTTA TTCGAGAACG ATTGGGGAGT CAAGAGATCT GCTCAGATGC
GCAAAGAGCG ACGGGAGACT CAGAAACGAT TCCAGGATGC CGAAGTCGCC GAAGCTGCCA
CGGCTCACCT CGAAGCTCGC CAACAAAAGT CGACTTCGGT CAGTCCTGCC GAGCTCTCCA
AGTTTATGGC TGGTTTGAAG AGTGGCAAGA GAAAGCCTTC AGTCTCGGTT TAAGCCATAG
CTTGAGGATG CCCAATGGGA CAGGCGAAAG TGGGGTTCTG GTATGTGCGA GTGCTTTGGT
TTTCGAGACG TATCCGAATG AAGTCCTTGT ATTTACGTA
 
Protein sequence
MSATHIENRD DNFLENKHFD HTERLENIKG WQEPPSPSGF GGHLIDENLV RVEGEDKVTW 
YLCFLISASA IAGFLFGYDT GVVGVALPLV GTDLGGSALN SSQQEIITAG TTIGAIFGSA
ILGGWGDRLG RKKAILISDV FFTIGAVIIA SSYSVPQIIV GRIVLGIGVG GAAVIAPLFI
TETAPTAVRG RCIGINAFFI PFGQVVSDAI GAGVQNMHNG WRLLFALGAV PSLLQLLLFH
YLPESPRILI LKGDTEGART VFQRIYPTAT SEMIEYKFRV AQEYVAATTA LQSGTTFWER
AKKVWRTGSY RRSIIAVSVL QAAGQLCGFN TLLYYAGTLF SLLGLSNPAL GGLIPAGTNA
VFLLIGMTTV DKIGRRGLLL IGVPIMLLGH VWNIVAFYYL CKPTGGFLDT SYTYDTTNVG
IVIGGIVFFV AGFGLTYSHL VWYQAEYLAL EVRSMGSGIA TTICWIANLV VSVSYLSELE
TMTPSGTYGF YFGISVVAFV FVVFCFPETK QLSIDETSLL FENDWGVKRS AQMRKERRET
QKRFQDAEVA EAATAHLEAR QQKSTSVSPA ELSKFMAGLK SGKRKPSVSV