| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNC06650 |
|---|
| Symbol | |
|---|
| ID | 3256317 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006685 |
|---|
| Strand | - |
|---|
| Start bp | 1939952 |
|---|
| End bp | 1941812 |
|---|
| Gene Length | 1861 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | 638255885 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_569916 |
|---|
| Protein GI | 58265520 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.179039 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTTCTGCATA CTCTTTCCTC TGCCATCTCT ATCTTCCTAG CAGCACACCA TGTGGTCGAG
CATATCTCGA ACATCAACCA GACTTTCAAT TCTCCGGTCG ACCCCACTCA CCAACCATTG
CCCACCAACT CTTCCCCTTC CCCGCTCCAG GACCGCCTTT CCACCCTCTC TGACTCGGTC
CGCCCCCATC TCTCGTGCCC TCCACACCAC CCGCCCCTCG TACGCAAAGT ACGAGCGTTT
CGACCAAAGA CCGAGTTTTG GCGGATCCCC AGGTCCTAGT GGAGGCGGCC CCACACTTTG
GCAGTATGTT AAACGGAGAA TGGGAGGGGA TAGAGCTGTG TGGGTCTATG GGATTGGGAT
TGGTGGTGGA GGTATTTATT ATGTGACCCA GTGAGTTGGT GCTTATCTGG TAACAACAAA
ATGAAAAGGC TTGCTTATGA CACATTCCTT TCTTTGTTTA GTCTTGAACG AGTTCCCGAA
ACAGGAAGAT TACGTTTCAT AGATGTTGAC GAAGCCCAAG AACGTGAACT GGGACGTCAA
ACCCAGCTCC AAACATTATC AGAATATGAC CGCGCCCTCC TCCCTCCTAA TCACCCGATA
AGCAAACGGG TAAGGAAGGT TGCAACTCGT ATCATCGAAT CGAGTGGATT GGGCAGGGTC
AAGTCGAGTG GAGAGATGGG TGCTATTGAG GGGACAGTGC CCGCTTGGGG TGGAGGAGTG
GATGTGAAGG ATATATTTAT GGGAGGTGGA GAGGGTGGTA AGGAGGTGAG GGAAGGGAAA
GATACGGAAT GGGAGGTATG TGTCTGAACC TAATCTAGCA TATGCTTCCA TATCTATCCT
TGGCACTGGC TCATACTCGA TTTTGATAGG TATATGTCAT TGACGACAAG AAAACCAAGA
ACGCTTTCGT CCTCCCTGGT GGGAAGATCT TTGTCTTTAC AGGTATCTTG CCCGTCAGTG
CCAACGATGA TGGATTGGCC ACTGTTCTTG GGCACGAAAT CGCGCATCAA GTGGCTAGGC
ATCCTGCGGA GAGGATGAGC TCTATGAAGG TTCTCTTTGC TCTTGGGCTT TTGTTGGAGA
CTCTTGGGCT TGATGTAGGT GTTAGTCGTC TACTCTTGAC TTTTATGCTG CAGTAAGTTA
CATCAATCTC TTTTTTTCGT CTCATCTTGG ATCCCAAATT GACGGTGCGT GTACTTGTTA
GGTTGCCGAA CTCGAGAAAG AATGAGAGTG AAGCCGACTT TATCGGTCTC CGTCTCATGT
CGTACGTATA CATCTCATTC CTTTCCGTTT CCCGTATATA ATCGTCATTT ATTATTTCCA
AAATCTGAAC TGACACATGA ATTCCCCCCT TTCCCCGGTA AACTGGCAAA CAGACGAGCG
TGCTTCGATC CTACTGAATC TTCAAAAATG TGGCAACGCA TGTCAGCTTC CGAAGGCGGT
AAAGGCCTGT CAGTCGACTT TCTTTCTACT CACCCAGCCA ATGCGAAACG TATAAAGCAG
CTTGAGAATT GGATGCCCGA GGTAAGCCCC TTGCTTCCCC TCCTCCATCA ATCCTGTCCT
TCCACCCTTC CCTTCCCGCC GTTACATGTG AGCTAATCAT CCAATTCATC TCATTCTTTT
TAACACATGC AAAAAACCAA CAGGCACAAC AAATTAGAGC TGCAAGTCCT TGCGGAACAA
CGTCGGACAA TTTCAATGGA TTCTTAGATG CTGTTAACCC TAATGGGGGA ACTTATGGCT
CAAGACTTTG GTAAAGTAAG GGGGTATATA TCCAGTTGGG CGGGAAGTCA TTGGGAACTG
AGGGGAGAAA AATCCTGATC CCGTATTAGT ATAAAGGTGT AAACGGTATA ATAGCATGCA
G
|
|---|
| Protein sequence | MWSSISRTST RLSILRSTPL TNHCPPTLPL PRSRTAFPPS LTRSAPISRA LHTTRPSYAK
YERFDQRPSF GGSPGPSGGG PTLWQYVKRR MGGDRAVWVY GIGIGGGGIY YVTHLERVPE
TGRLRFIDVD EAQERELGRQ TQLQTLSEYD RALLPPNHPI SKRVRKVATR IIESSGLGRV
KSSGEMGAIE GTVPAWGGGV DVKDIFMGGG EGGKEVREGK DTEWEVYVID DKKTKNAFVL
PGGKIFVFTG ILPVSANDDG LATVLGHEIA HQVARHPAER MSSMKVLFAL GLLLETLGLD
VGVSRLLLTF MLQLPNSRKN ESEADFIGLR LMSRACFDPT ESSKMWQRMS ASEGGKGLSV
DFLSTHPANA KRIKQLENWM PEAQQIRAAS PCGTTSDNFN GFLDAVNPNG GTYGSRLW
|
|---|
| |