Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNC05450 |
Symbol | |
ID | 3256801 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006685 |
Strand | + |
Start bp | 1622799 |
End bp | 1624449 |
Gene Length | 1651 bp |
Protein Length | 304 aa |
Translation table | |
GC content | 48% |
IMG OID | 638255763 |
Product | oxidoreductase, putative |
Protein accession | XP_569748 |
Protein GI | 58265184 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGACG GCTTCTCGCC ATTGGCGATT AGCGAGGGGG AGATTTCCTT TATCACGGCG CACCGCCTTC ACCTTATCGC CCGACTGCAA CTCTTCCGCA ACTGTCTTTA TATACCTGGT CTCCCCCTCT TCGCCCTCAC GTGTAACCAT ATACAACCAT GCCCTCCTCA AAGCCGCTGT TCAACACTAC ACGGTGAGTA CGAGTACTGT GACTCCATCG ACATCACCTT CCCTTACTGA CACGTCACAG TCTCCAAGGC AAGACCGGTA AGTCCGTAAG CACAAATGCC ATCTGGGCCA ACTCTAATGC GTCCACACAG CCGTCGTTAC TGGCGCTTCG GGCGGTATCG GCGCTGCCAC TGCCGTTCTC TTTGCCCGAG CTGGATGTAA TGTCATCCTC CTCGCTCGTC GCCAAGATGC CCTCCACAAA GTTGCCCAGC AATGCAAGGA AGAAGGCGCT GAAGGCATCA AGGTGTTTAT CAAGACGCTC GATGTGAATG ATAGGAAGGC CGTGGACGAT CTGATCCCTG CGCTTAAGAA GGAGGGCTTT GAGACTTTTG ATGTGTGAGT GATGTGAAGG TATGAGCGAA GAAATATAGC GATCTGAGGC TTATCATTGA CGGTAGTTTG GTCAACAATG CGGGTGGTGC TATTGGCAAG GATAAAGTTG GAGGTAAGTT TGAAGTTGAA CTGTATACAT TGATTCAAAG CTGATTTATC TGGCCTCTCT TGCAGAAATC TGTATGTTCA TGATGATAGA CTGATATGTG ACAACAAAAT GAAACGGTAA CTGACAAGTA GTTAGCACTT GCGGATATTG ACACCATGAT CTCCACCAAC CGCAAGTTTC CTAGTCCTTC ATTCTTACTC ATACTAACAA TATTTATAGT CATCTCCGTC ATGCAAATCA CCCAGCTCTT CTTGAACGAG ATGAAGAAGG TCGACACTGG CGTACGTCTT TAATCTACCC TTCTTTCGTC CTCATAGCTC ATCTCTTCTT ATATAGCACA TCATCAACAT TGGCTCTATT GCTGGCCGAG AGCCATATGC CGGGGTAAGT CGTAATCATC TTCCTTATCA ATCCATCGTT GCAGTCCTTA GCTAATCTTT CATCAATGTC ATTAGGGCGG TGTCTACTGC GCTGTCAAAC ACGCCGTTAG ATCCTTCACC AGCACCCTCA TGAAAGAAGT CGTCGCTACC GGTATTCGAG TGACAGAGGT CGCGCCCGGA TTTGTTGAGA CCAATTTTTC GGTCACAAGA TTTAGGGGGG ACGAGGCTGC TGCCAAGAAG ATTTATGAGG GGATGCAACC TTGTGAGTTT ACGATAATTT TATGAAATGC CAAAGTATCA AAATCTGATT GCCTTTCCTT GTTCTATCAG TGCTGGCTGA GGATATCGCC GAAGAAGTCG TCTGGTGTGC CCTTCGGCCT CCTCATGTAC AGATCGCCGA AATGCGTAAG TTTCCATGTC CCCCCCCATC TTCTACCCAT TGCTTGTCGG TCCACTGAAA GTTGTCTTTA GTGGTTTTCC CTAATGCCCA GGCTAGTGCG GAGATTATTG CCAGAAAGAT ATCATCATAG CATTGGCTGT CTCGTTTAAG TGTGGGAAAT TTGGTGCATA GTAGAATAAA GAACAAAAAT TGAACCTCCT G
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Protein sequence | MSDGFSPLAI SEGEISFITA HRLHLIARLQ LFRNCLYIPG LPLFALTCNH IQPCPPQSRC STLHAVVTGA SGGIGAATAV LFARAGCNVI LLARRQDALH KVAQQCKEEG AEGIKVFIKT LDVNDRKAVD DLIPALKKEG FETFDVLVNN AGGAIGKDKV GVISVMQITQ LFLNEMKKVD TGHIINIGSI AGREPYAGGG VYCAVKHAVR SFTSTLMKEV VATGIRVTEV APGFVETNFS VTRFRGDEAA AKKIYEGMQP LLAEDIAEEV VWCALRPPHV QIAEMLVFPN AQASAEIIAR KISS
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