Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNC05070 |
Symbol | |
ID | 3256332 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006685 |
Strand | + |
Start bp | 1521753 |
End bp | 1524930 |
Gene Length | 3178 bp |
Protein Length | 933 aa |
Translation table | |
GC content | 48% |
IMG OID | 638255725 |
Product | dynamin GTPase, putative |
Protein accession | XP_569803 |
Protein GI | 58265294 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.18591 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TATACACAAG ACAGTTCGGC CAACGAATCC ACCTATGACA TTCTGAACGA CTGATGTCTT CAGCAAAAAC AATCCTCCGC CGGCTTCCCA CAGCCAGGCC GTACATCCTC AATCGCACAC GGCCTTCTGT CCACGCTCGG TTATCTTTAA CACCACCAGC AAGACAAGTT CATGTCAGAG CAATCTCTTT CTCGTCCATA CCCAGGGCTA TGGCTAGAGC CTTCAGAGTG CCTCTCTATG GCGCAGCTAT AGGCGCTGGT GGAGTGGGAT ATGCGAACTA CAAATTGGAA AGTGTTCGTA ACGCAACGTC GGAGATTCTG TCTAATGTGA CAGACAAGCT ATCATCAGCT TATGACTCGG CCTCGCAACT TGGATTCTCT ATCCAAGGCT CTCTCTCAGA CACGGCGTCA GGTGTACAAG GTACTGCAGA TGCGTTAAAG CAAGGGACAA AAGATTGGTG GGATGCTTTC ACTTCACAGT TCAGCCGAGA TCAAGAGACG TCTTCTGGGA ACGGTGCTGA AGGGAAGCGA AAATGGAGGC CAGGAGAAGG CCCAGGGGAG CCAAACAATG GTGGGCCAGC TGGTGAGGAG GCTCTAATAG GACTTGTGGG TGCGGCGGCT GTTGCAAAGG CAGAAGAGGA GAGGAGCGAC CCATTCAGCT CTGGCGGTGG GGATGAGCAT CATTTGTTGC AATTGACAAG GAAGCTCATC GAGATTCGCT CGGTATTGTT GAGCGTGGAT CAGAGCGATG CTCTCAAGTT GCCATCCATT GTCGTCATTG GAAGCCAGAG TTCTGGAAAA AGTAGTGTTC TCGAGGCCAT TGTCGGACAC GAGTTCTTAC CCAAGTGAGT ACGCTCAGAA TCAAGAAGAC TTGCAACTAA CTATAATAAG GGGCAACAAT ATGGTGACTC GGCGCCCTAT CGAGTTAACT CTGATCAACA CTCCCGCTAA CGCTGCATCC TCATCCACGA CCCCCGCAGA GTACGGCGTC TTCCCAAACA TGCCTGGTAT GGGCAAGATC ACTTCGTTCG CTACGATTCA GAAAACTCTT ACCGACCTCA ACCTCTCTGT TCCACCTGAA CTTGCCGTCT CCGACGATCC TATCCACTTG CAAATCCATT CACCCCATGT TCCCGATTTG ACTCTTATCG ATCTTCCAGG CTATATCCAA ATCTCATCTA TGAATCAACC GGAAGAGCTC AAGGACAAGA TCTCAAATCT ATGTGACAAA TACATCCGGG AGCCTAACAT CATTCTTGCC GTTTGTGCCG CCGATGTTGA CTTGGCCAAC TCTCCAGCTC TACGAGCAAG CAGAAGGGTT GATCCGTTGG GCACCAGGAC AATCGGTGTA GTGACCAAGA TGGATTTGGT GCCACCCGAA CAGGGTGCGG CGATTATCCG CGGTGATAGG TATCCCCTTC ACTTAGGATA TGTCGGTGTC GTTTGCAAGG CTCCCCCTAC TGCAGGTGTT ATAAGGTCGT TTATGGGCGA CAGAGAGTCT CCGAATGTTA CAGGCGCCGT GCTTAAGCGT GAAGAACAAT TCTTCGGTGG TGAAAATTCC AAGCACTTCA AGCACGATCA GCTCATGTTC GGTACCGACA CTCTTCGTCG ACGTCTCATG GATGTGCTGG AAACGAGCAT GGCTTCAAGC TTGCATGGTA TTACTAATGC CGTACAACTC GAGCTTGAAG AGGCTAGCTA TCAATTTAAG GTCCAATATA ATGATCGACG TATTACGTCC GAGTCTTACA TGGCAGAGAC TATCGATGCC CTCAAAGCTC GCTTCAAAGA GTACACTGCG CAGTTTACCA AACCTGCCGT CCGCGCCAAG CTCAAGGATA TGCTCGACGA CAAGTTGATG AACATTTTGG AGCAACTGTA TTGGAACGAT CCAAGAGCTG CGGAATTGGG CAAGTTAGCT GATGACAGGA AGCTGTCTGC TAAGGATTTG GATCCGTATT GGAACTACAA GCTTGAAACG GCGAGCTCGC TTCTCACCAA GTCTGGCGTT GGTCGCGACT CTACAACCCT TGTCGCTGAC GGTTTGCGGC AGTTGATCGA CTCTATTGCT ACCGGTGAAC CTTTCACTTT CCATCCATCC GTTACCGACC GTATCACTGA ATTCTCCCTT GCCATCCTGC GTGAGCGTAT GGGCATCACC GCCGATCAAG TAGAAAACTG TATCAAGCCA TACAAATACG AAGTAGAAGT CGATGACCGA GAATGGGCGG TAGGCAGAGA CAGGGCAGAA GAGAAGTTTG CAGAAGAGAT CAAGAGATGT GATGCGAAGC TTGCAGAGAT TAAGAGCAGG GTTGGAGGGT CAAGAAAGTT AGGAGGTCTG ATAAGGCATG TGGGCGATTT GGAGAAATGG GAGGAGGAAA GAAGAAGGAG ACGATTGAGT GGAGTGGCTG GTGAAGCAGA TGACAGTGCT GTACCCGTGC TGGATGCGTA TCAGTACTCG CCTGCTCAAA TCGTAGATGG TAAGGTCTTT GGTATCTTTC CTCAGCGACA TCGGCTAACA CTTCAACAGG TCGTCACGCC CTTCTCCTTT CAAACCGCCT TGCCATCCTA AAATTCCGAC AACAAGCTTT AAAATCTCGA CGATGCCGTT CTGGTCCTGA ACAGGCGACT TTCTGTCCTG AAGCATTCCT TGCCGTGGTG GCTGACAAGC TCGCGTACAC GAGTACCATG TTCATCAATA TCGAGCTTTT GGAACAGTTC TTCTATCAAT TCCCACGGGA AATCGATTCA AGAATTTTGT ATGATCTGAA TGTGTGTAAA ATTCTTTTCA CTGCCTCGTC GCAGAAATAC TAATGAACGC TCGCAGAGGG ATGAGATTGC CAAATTTGCT AGGGAGAACC CAAAGATCAA GCAACATTTA GATTTGCAAG AAAGAAAGGA CAAGTTAGAG CAGGTATGTC AAGTTATCTT AAGCCTTCAT TTGATAGGAA GCTCAAGGTC TATTTCTATA GGTAATGAGG TCTCTGCAGG GTCTTGTTAA CCTTCAAAAA GACACCAAAG CGCCATCAAC AAAGAGAGAA GGCTTGTTCA CCAAGTTTTT CTAAACTTGC AAACGAGTAT AAAAGTGTGT AGGATAAAAG GGTTAGAGTC GTTAGTTTAG TTTGCACCGT GTGGATTGTT TTGTTTTTCT TACGCTTCTC ATGATATGTA TCAAGTCA
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Protein sequence | MSSAKTILRR LPTARPYILN RTRPSVHARL SLTPPARQVH VRAISFSSIP RAMARAFRVP LYGAAIGAGG VGYANYKLES VRNATSEILS NVTDKLSSAY DSASQLGFSI QGSLSDTASG VQGTADALKQ GTKDWWDAFT SQFSRDQETS SGNGAEGKRK WRPGEGPGEP NNGGPAGEEA LIGLVGAAAV AKAEEERSDP FSSGGGDEHH LLQLTRKLIE IRSVLLSVDQ SDALKLPSIV VIGSQSSGKS SVLEAIVGHE FLPKGNNMVT RRPIELTLIN TPANAASSST TPAEYGVFPN MPGMGKITSF ATIQKTLTDL NLSVPPELAV SDDPIHLQIH SPHVPDLTLI DLPGYIQISS MNQPEELKDK ISNLCDKYIR EPNIILAVCA ADVDLANSPA LRASRRVDPL GTRTIGVVTK MDLVPPEQGA AIIRGDRYPL HLGYVGVVCK APPTAGVIRS FMGDRESPNV TGAVLKREEQ FFGGENSKHF KHDQLMFGTD TLRRRLMDVL ETSMASSLHG ITNAVQLELE EASYQFKVQY NDRRITSESY MAETIDALKA RFKEYTAQFT KPAVRAKLKD MLDDKLMNIL EQLYWNDPRA AELGKLADDR KLSAKDLDPY WNYKLETASS LLTKSGVGRD STTLVADGLR QLIDSIATGE PFTFHPSVTD RITEFSLAIL RERMGITADQ VENCIKPYKY EVEVDDREWA VGRDRAEEKF AEEIKRCDAK LAEIKSRVGG SRKLGGLIRH VGDLEKWEEE RRRRRLSGVA GEADDSAVPV LDAYQYSPAQ IVDGRHALLL SNRLAILKFR QQALKSRRCR SGPEQATFCP EAFLAVVADK LAYTSTMFIN IELLEQFFYQ FPREIDSRIL YDLNRDEIAK FARENPKIKQ HLDLQERKDK LEQVMRSLQG LVNLQKDTKA PSTKREGLFT KFF
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