Gene CNC03730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC03730 
Symbol 
ID3256796 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp1176173 
End bp1177734 
Gene Length1562 bp 
Protein Length303 aa 
Translation table 
GC content46% 
IMG OID638255594 
Productconserved hypothetical protein 
Protein accessionXP_569605 
Protein GI58264898 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GCTTTCTTCA ACAATCAGAA GTCGCCTGCA CTTATTTACT GCCATTCACT ACTATTCATA 
CAAACAAATA TTTCCTCATA ATCATACAAA ATGAGCGACG GTGAACACGC ACTCGCTAAA
ACTGTTTTCG GCTCCGACCG ACTGTCTGCC TCTAAGCTTT TCAACGTTGA TGGCTGGGTC
GTCCTGGGTG CGTGAATGTG TTTCTTGCCC ACATACTATG CGACTGCTGA TGGGCAGCAA
AATCTAGTAA CCGGTGGTGG TACTGGCCTC GGTCTCATCA CAGCGGGTGC ATTGGCTGAA
AATGGCGCCA AAGTATATAT TACTGGTCGA AGATTAGAGC CTCTCGAGGA AGCTGCGAAG
ACTGCCGCGC CTAAGGGAGG TAAGGGGACG ATTATTCCAC TCCAAGCCGA CATGAGCAAG
AAGGAGGATA TCGACAGTGG GTAAATTCCA TCTTCCATAT GCGCAACTAT GGTATTGACC
CTGAACTCTT TTCAGAGGTA AAGGAGACTA TCATTTCGAA GGAAAAGTGG TTGAATGCTC
TCATCAACAG TATGTTGTAT TGCTGTCATA TGGAAATAGT CGCTGAATTT GTTCCAGACC
ACGGCGTTGC AATCACTCCC CCGAAGATTG ACGAGGCCGA GCAGACTGCC GAGGGATTGT
CAAAGTTCAT GTATGATGAA GAGAAGTTTG ACAACTGGTA AGTCGAGGTT GCTTTGCTTT
CACAAATGAC CATCTGTAAC GCTATATCTA GGCTTGATGC CTACCGAATC AACACCGCCT
CATATTACTT TACTTCCTTC GCCTTCCTTC CTCTCTTGGC TGCTGCTAAG AGCGTTGGTA
ACTATTCTGA GCCTGGTAAC ATCATCAACG TTGCTTCCGT CAGTGGAGTG GCCGTTACCT
CTCAAGGAGG TCAATTCAGC TACAACTCGA GCAAGTGAGT AGTACCCCCA TGACTTCATA
GACAAGACTG ACGATAATTG AAAGAGGTGC TACTATCGCT CTCACTCGTA TGTTGGCTAC
GGAATTGGCT CGACGAGAGC TAGGAATTCG AGTCAATATG ATCTGCCCTG GCTATTTCCC
TTCGGTATGC CTGGTGTACA TCATTTAGTC TGCATCATTT TATGCTGACA ATCCACTCAG
GGAATGACCG GGTATACCGA GGATGACACC CAGCCCAGCA AGGAGTTCAA AGACAAGATG
GGCACGCCAT TGGGTAGGAC TGGAAATGCA ATTGACTATG CCCAAACCGT CTTTAGCCTT
CTTTCTGTGA GTATCGTGAG ATGCTCATTG ATTGATTGTC TGCATACTAA GTTCTGCCGT
TAGAATCAAT ACATCACTGG AAGAGAGCTG GTCGTCGATG GCGGTTATCT GCTTAATCAG
AGTGAGTTCT GCTGGAGCAG TTGATTGCAA TGCTTGAAAA GTAATTGACC CAATGAACCA
TAGTCTAAGC TGCTGAAAGT TAATCCTATT TGTTGGTACT GAGATTGAAG GATCAGAATG
ACAAGTATAA TAGTGCTGTG CTGTGCCGTT GTTTGTGATG ATATGCAGCA GCGTAGCCAA
GA
 
Protein sequence
MSDGEHALAK TVFGSDRLSA SKLFNVDGWV VLVTGGGTGL GLITAGALAE NGAKVYITGR 
RLEPLEEAAK TAAPKGGKGT IIPLQADMSK KEDIDKVKET IISKEKWLNA LINNHGVAIT
PPKIDEAEQT AEGLSKFMYD EEKFDNWLDA YRINTASYYF TSFAFLPLLA AAKSVGNYSE
PGNIINVASV SGVAVTSQGG QFSYNSSKGA TIALTRMLAT ELARRELGIR VNMICPGYFP
SGMTGYTEDD TQPSKEFKDK MGTPLGRTGN AIDYAQTVFS LLSNQYITGR ELVVDGGYLL
NQI