Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNC03730 |
Symbol | |
ID | 3256796 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006685 |
Strand | + |
Start bp | 1176173 |
End bp | 1177734 |
Gene Length | 1562 bp |
Protein Length | 303 aa |
Translation table | |
GC content | 46% |
IMG OID | 638255594 |
Product | conserved hypothetical protein |
Protein accession | XP_569605 |
Protein GI | 58264898 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GCTTTCTTCA ACAATCAGAA GTCGCCTGCA CTTATTTACT GCCATTCACT ACTATTCATA CAAACAAATA TTTCCTCATA ATCATACAAA ATGAGCGACG GTGAACACGC ACTCGCTAAA ACTGTTTTCG GCTCCGACCG ACTGTCTGCC TCTAAGCTTT TCAACGTTGA TGGCTGGGTC GTCCTGGGTG CGTGAATGTG TTTCTTGCCC ACATACTATG CGACTGCTGA TGGGCAGCAA AATCTAGTAA CCGGTGGTGG TACTGGCCTC GGTCTCATCA CAGCGGGTGC ATTGGCTGAA AATGGCGCCA AAGTATATAT TACTGGTCGA AGATTAGAGC CTCTCGAGGA AGCTGCGAAG ACTGCCGCGC CTAAGGGAGG TAAGGGGACG ATTATTCCAC TCCAAGCCGA CATGAGCAAG AAGGAGGATA TCGACAGTGG GTAAATTCCA TCTTCCATAT GCGCAACTAT GGTATTGACC CTGAACTCTT TTCAGAGGTA AAGGAGACTA TCATTTCGAA GGAAAAGTGG TTGAATGCTC TCATCAACAG TATGTTGTAT TGCTGTCATA TGGAAATAGT CGCTGAATTT GTTCCAGACC ACGGCGTTGC AATCACTCCC CCGAAGATTG ACGAGGCCGA GCAGACTGCC GAGGGATTGT CAAAGTTCAT GTATGATGAA GAGAAGTTTG ACAACTGGTA AGTCGAGGTT GCTTTGCTTT CACAAATGAC CATCTGTAAC GCTATATCTA GGCTTGATGC CTACCGAATC AACACCGCCT CATATTACTT TACTTCCTTC GCCTTCCTTC CTCTCTTGGC TGCTGCTAAG AGCGTTGGTA ACTATTCTGA GCCTGGTAAC ATCATCAACG TTGCTTCCGT CAGTGGAGTG GCCGTTACCT CTCAAGGAGG TCAATTCAGC TACAACTCGA GCAAGTGAGT AGTACCCCCA TGACTTCATA GACAAGACTG ACGATAATTG AAAGAGGTGC TACTATCGCT CTCACTCGTA TGTTGGCTAC GGAATTGGCT CGACGAGAGC TAGGAATTCG AGTCAATATG ATCTGCCCTG GCTATTTCCC TTCGGTATGC CTGGTGTACA TCATTTAGTC TGCATCATTT TATGCTGACA ATCCACTCAG GGAATGACCG GGTATACCGA GGATGACACC CAGCCCAGCA AGGAGTTCAA AGACAAGATG GGCACGCCAT TGGGTAGGAC TGGAAATGCA ATTGACTATG CCCAAACCGT CTTTAGCCTT CTTTCTGTGA GTATCGTGAG ATGCTCATTG ATTGATTGTC TGCATACTAA GTTCTGCCGT TAGAATCAAT ACATCACTGG AAGAGAGCTG GTCGTCGATG GCGGTTATCT GCTTAATCAG AGTGAGTTCT GCTGGAGCAG TTGATTGCAA TGCTTGAAAA GTAATTGACC CAATGAACCA TAGTCTAAGC TGCTGAAAGT TAATCCTATT TGTTGGTACT GAGATTGAAG GATCAGAATG ACAAGTATAA TAGTGCTGTG CTGTGCCGTT GTTTGTGATG ATATGCAGCA GCGTAGCCAA GA
|
Protein sequence | MSDGEHALAK TVFGSDRLSA SKLFNVDGWV VLVTGGGTGL GLITAGALAE NGAKVYITGR RLEPLEEAAK TAAPKGGKGT IIPLQADMSK KEDIDKVKET IISKEKWLNA LINNHGVAIT PPKIDEAEQT AEGLSKFMYD EEKFDNWLDA YRINTASYYF TSFAFLPLLA AAKSVGNYSE PGNIINVASV SGVAVTSQGG QFSYNSSKGA TIALTRMLAT ELARRELGIR VNMICPGYFP SGMTGYTEDD TQPSKEFKDK MGTPLGRTGN AIDYAQTVFS LLSNQYITGR ELVVDGGYLL NQI
|
| |