| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNC03290 |
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| Symbol | |
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| ID | 3256325 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006685 |
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| Strand | - |
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| Start bp | 1037564 |
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| End bp | 1039904 |
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| Gene Length | 2341 bp |
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| Protein Length | 652 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | 638255552 |
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| Product | tetracycline efflux protein, putative |
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| Protein accession | XP_569993 |
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| Protein GI | 58265674 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0454964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACGC ATGAAACAGG CGAGTTTGTG GAGGATCAAG ATGGAAAAGC GGAGGATGAC
GGGCTGCATA CTCACGATGA AGAGCATGAG CATGGACATG AAGAGGGTGA TCAGGAGCAT
TTAGAACAAA GTCACAAGAC TCTTCGTTCG GAAAAAGGTA AAGAAGACAA TCGGGAGCAA
GGGAAGGATG AAGAAGCCGA AATAGAGGGT AAAAAGTCGG GGCAGAAGAA GACGTTTGAG
CTACAAGATC AGACGAATCT GTTGCCAACC AAGCAAGTTA TATTTGTCTT TGTCGGACTA
ACTTGTGCTT TGTTTTGCTC TTTACTGGAT CAAACCATGT GAGTTTCGCT TCCGTACGTG
CGCTATGCAT GCTGACGACG ATGACTAGCG TGACCACTGC TTTACCGACT TTGGGACAAG
TATTTGGAAG GGCAGACATT AGTCCATGGG TTGGGACGGC CTATCTATTG ACTTCGACGG
TAAAGCCATT ATCGTATTTC TGCTCATCTG AGACTGAACC AAAGTGTTTC TAGGCAACTC
AACCGGTCTA TGGAAGATTA TCAGATATCT TTGGCCGAAA GTTCACCCTT TTGGGCTGTT
TATTCATATT CCTGATGGGC TCTCTAGCTT GTGCCCTTGC CCAGGTATGT CCGATCGACG
ATACACGGAC GTCCCTAGCT GATTCGCTCG CAAAGACCAT GATCCAACTG ATAATATTTC
GCGCAATACA AGGCTTGGGA GGTGGTGGAA TATTGACGCT GGCAATGATC ATCAGTGAGT
ATAATTGAAA ACGCCTGTCA AGGCAGGGTT TGTTGAAGCC TTTTTTTTTT ACCAGTTTCC
GATGTGGTTT CCTTGAAAGA AAGGGGAAAG TATCAAGGTA TCACTGGATG CGTGGTTGCG
CTTGCCAACT CTTGCGGTCC CATAGTTGGC GGAGCATTCA CGGAAAACGC CTCTTGGAGA
TGGTGTTTTG TAAGTTTGGC TAAAGTCACT GACTGATCTT GCTGACATCT ACTAGTATAT
AAATCTTCCC CTGACATCAA TCTCGATGAT CATCATCGTC TTCCTTCTCC CACTGCGTCG
CGTTCGCGGC TCAATGGTCG CCAAGATTAA GAAACTCGAT TTCTACGGAT CTATTCTCAC
GCTCGCGTGG GCCGCACCGT TCCTCATTGC GTTGTCTTGG GCGGGAAGTC AGTACGCATG
GGACAGCGCG GCGGTATTGG TCCCGCTGCT TGTGGGTCTG GCATTGTTGG GGCTGTTCAT
ATTTGTGGAG GCCAAGGTGG TGAGTCTGCC ACTTGTCCCG ATGCACATCT TCAAGAATGC
TTCGGTGTCG GCATGCTTCT TTACCACGTT TATGAATGGA TTGAGCTTTT ACGCCACGCT
GTATGTGAGT GTATTCCCTT TTTTGGGGGG GGCCTTGTTG TTCGACGCAT TCAAAACAAG
TGACTAATAT CGGACGTTTA CAGTACCTTC CGCAATACTT TCAGATTGTC CGAGGGGCGT
CTGCAATCAG GTCGGGTGTT TTGACCCTAC CGCTCATGCT GGTTCAAACA GTCACCTCAT
TCACCAGTGG TATAATCCAA TCCAAAACGG GTGACTACTG GTGGAACCTC GTTGTAGGGT
ACACCATCTG GACGATCGGT CTCGGTCTGA TATCGTCCAT TACTTCTACG ACGAGTATTG
CCAAACTGTC GGGTTACCAG ATTATTGTCG GCATCGGTGC CGGTCAGACC TTCCAGACGA
GTTTGGTGGC TATCCAAGCG GGTGTGGAGA GGAAAGACAT GGCAACTGCG ACGGGTCTTC
GAAATTTTCT TCGACAGTTG GGTGGGACAA TTGCGCTCGC GGCGTGCAAC TCGATTGTGA
ATAATTGTGT GAGACGGAAC CTTTCTGGGG TTTTGCCGGG GACGGCGTAC AAGGCGATTC
TGGAAGATCC TACTCGGGCG ACGAGCTTGG GTCTGTCTGC GTCAGAATTG AGTGCTGTGA
CGGATGCCTA TGGTGAGTGC CGGTTCGGAG GGATGTATAT GAATATGGGC AAGGTAATGC
TGACAGGGAG GGCGGCGACC TGAACGTAGC GCGGGGCATC AATGAAGTCT TTTGGTTTTG
TGCGCCCTGC GTGGGGATTT GTATACCGAT AACGATCTTC TTAATTAAAA AAGTGACGTT
GAACCGGAGC GACGACGCTG TGAAAAAGGC CGAGGCAAAG GCGTGGGTGG AGAGTAAAAA
AGCGAAACGG GCAAAGAAGA GAAAGGGAAG TGAGGAGACG GTGGTGGACA GTGGAGCATC
GACAATGGTA TCAGGGGAAG AAAAAAAGCG TGATGGACGA CGGATAGGAA AAGAGCAGTG
A
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| Protein sequence | MTTHETGEFV EDQDGKAEDD GLHTHDEEHE HGHEEGDQEH LEQSHKTLRS EKGKEDNREQ
GKDEEAEIEG KKSGQKKTFE LQDQTNLLPT KQVIFVFVGL TCALFCSLLD QTIVTTALPT
LGQVFGRADI SPWVGTAYLL TSTATQPVYG RLSDIFGRKF TLLGCLFIFL MGSLACALAQ
TMIQLIIFRA IQGLGGGGIL TLAMIIISDV VSLKERGKYQ GITGCVVALA NSCGPIVGGA
FTENASWRWC FYINLPLTSI SMIIIVFLLP LRRVRGSMVA KIKKLDFYGS ILTLAWAAPF
LIALSWAGSQ YAWDSAAVLV PLLVGLALLG LFIFVEAKVV SLPLVPMHIF KNASVSACFF
TTFMNGLSFY ATLYYLPQYF QIVRGASAIR SGVLTLPLML VQTVTSFTSG IIQSKTGDYW
WNLVVGYTIW TIGLGLISSI TSTTSIAKLS GYQIIVGIGA GQTFQTSLVA IQAGVERKDM
ATATGLRNFL RQLGGTIALA ACNSIVNNCV RRNLSGVLPG TAYKAILEDP TRATSLGLSA
SELSAVTDAY GNADREGGDL NVARGINEVF WFCAPCVGIC IPITIFLIKK VTLNRSDDAV
KKAEAKAWVE SKKAKRAKKR KGSEETVVDS GASTMVSGEE KKRDGRRIGK EQ
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