Gene CNC02540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC02540 
Symbol 
ID3256393 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp728162 
End bp729665 
Gene Length1504 bp 
Protein Length291 aa 
Translation table 
GC content48% 
IMG OID638255474 
Productorganic acid transporter, putative 
Protein accessionXP_569547 
Protein GI58264782 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTACAG AACTCAAGAC GCCCCTGCGT GAGTGACACA CAAATCCATG CCGCTCTATA 
CCTTTTTTTC GGTTGGCAGG CCACGGAGAT TCCAATCAAA TACGTGGATT AGGATTGACT
GACGCGAGGA TACATGGATA GCCCTGCCCT TCATTTACAC CTTTGCCTCT GGCGCCATTG
CAGGTGAGCA ATCGTCGTTT GCGGCTGAGA CTATTGTACT GATAAGATGA TTACAGGCTG
TACTGAGTTG CTTGTTTGTC GTTATTTCAA ATCGGTCAAT GCAGCAGCCT GACTGATTGA
GACTCCCAAT AGCTTCTCTA TCCTCTGGAT GTGGTGAAAA CGCGTCAGCA GCTTGATACT
GGCAAGCAAG GTGCCAACAT GGTACAGGTG TTCAAGAACA TCGTCGCACA GGAGGGGTAA
GTTCATCAGT CTTCTTACGA TGCTCACAAC ATGGCAATTT CAGTCCCAGG CGCTTGTACA
GGGGCATTTT GCCGCCTCTC ATGCTCGAAG CCCCCAAGCG AGCAGTCAAA TGTATGTTGC
CTTCAGTCCG CATTCGATTG CCTATGTGAG CTGATGTTTG GGCAGTTGCT GCTAACGGAT
CTTGGGGTGC TTTCTTCACC AACAACGGAC AGCGAAAAAA CACACAAGCG ATTGCCATCC
TTACCGGTTG TTTTGCCGGT GCTACCGAAT CCGTTGTAGT CACTCCTTTT GAGCTCGTCA
AAATTAGGAT GCAGGACAAG AGCTCCACTT TCAAGGGTCC AATGGATGTT GTCAAACAGG
CTCTTGCCAA AAGTGGTCCT CTTGGATTGT ATCAGGGTAT GGAATCCACC TTCTGGAGAC
ACTGGTGGTG GTGAGTAACT TGCCGTCTTA AATGTTGAAA GGGTTGATAA GAACATATTG
CCAGGAATGG TGGTTACTTT GGTGCCATCT TCGCCGTAAG AAATCTACTC CCCAAGGCCA
CCGTGAGTAT CAAAGGCGAT TACCTATTTA TTAGTATGAT GGTGACCTTT CACAGAGCAA
AAAGCAGGAG CTGTCCAACA ATCTCATTGC AGGTACCGTT GGTGGCTTCA TCGGGACGTC
CTTGAATACC CCGTGTTGGT TTTTTTTTCT ACTTCTGGAA CAGTATTTGT CGTTAACAGC
CTATCTAGTT GATGTTGTGA AATCCCGAAT TCAGCTTCAT GGCACAGGAG AATGGTGCGT
CATCACTTCC CAATAATGTG TCTAGCTCAC CGCGTATATC AGGGCTTATC CTGCGCTCCT
CAAAGTCGCC AAGCAGGAAG GCATGGCTGG GCTGTACAAG GGCTTCGCGC CCAAGGTCTT
ACGACTCGCT CCTGGTGGCG GAGTCTTGTT GTTGGGTGAG TGACTGTTTT CGTGAAGACC
CTTGAGACTG ACGATGAGTG AACAGTGGTG GAAGCGTTGT CTACAGTGTT CAGGAACTAT
CTTGGCCCTC CCTATGTTTG ATTGGTTTAT GTTTCTGTCT TTGCCTATGC AAGAGATCTT
CGCC
 
Protein sequence
MSTELKTPLP LPFIYTFASG AIAGCTELLL LYPLDVVKTR QQLDTGKQGA NMVQVFKNIV 
AQEGPRRLYR GILPPLMLEA PKRAVKFAAN GSWGAFFTNN GQRKNTQAIA ILTGCFAGAT
ESVVVTPFEL VKIRMQDKSS TFKGPMDVVK QALAKSGPLG LYQGMESTFW RHWWWNGGYF
GAIFAVRNLL PKATSKKQEL SNNLIAGTVG GFIGTSLNTP FDVVKSRIQL HGTGEWAYPA
LLKVAKQEGM AGLYKGFAPK VLRLAPGGGV LLLVVEALST VFRNYLGPPY V