Gene CNC01700 details

Gene Information

• Locus tag: CNC01700
• ID: 3256300
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006685
• Strand: +
• Start bp: 469838
• End bp: 471806
• Gene Length: 1969 bp
• Protein Length: 510 aa
• GC content: 52%
• IMG OID: 638255390
• Product: fumarate hydratase, putative
• Protein accession: XP_569517
• Protein GI: 58264722
• COG category: [C] Energy production and conversion
• COG ID: [COG0114] Fumarase
• TIGRFAM ID: [TIGR00979] fumarate hydratase, class II

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGACTC CCACAAAGAC ATCCAGTCTC AAAACCACCC AGATGCTCGC CCGATCACTC 
AGAGTACGCT TCCTTCTCTC CTTTCGTCCC CGCCGTCAGC TCACTCCTCC AGCTCACCCG 
TACTCTTCCC CGTGTCTCTC TTGCTTCTCG CGGATTCTCC TCCACTTCAT ACATCATGGC 
AGAGCAAAAG TTCAGGAAGG AGAAGGACAC TTTTGGTGAC CTCCAGGTCC CCGCTGACAG 
GTACTGGGGC GCCCAGACGC AGCGAAGTTT GATGAACTTT GACATCGGTA TGTCTCTGGG 
TCTTCCGTCG GGGAAATGAT AGCTAAGCGA GCTCAGGCGG TCCGACTGAG CGAATGCCTC 
CTCCCCTCAT CAAGGCCTTT GGTGTCCTCA AGAAGGCCGC CGCTGCTGTT AACCAGACTT 
ATGGCCTCCC TGCCGAGGTT GCCGAGCACA TCCAAAAGGC TGCTGACGAA GTCATTTCTG 
GCAAGCTCAT TGACGAATTC CCCCTCGTCG TCTTCCAAAC TGGTTCCGGC ACCCAGACCA 
ACATGAATGT GAACGAGGTC ATTTCCAACA GGGCCATTGA GATGATGGGT GGTGAGCTTG 
GCAGCAAGAA GCCCGTTCAC CCCAACGACC ACGTCAACAT GAGCCAGTCT TCCAACGACA 
CGTGAGTTTT TTTCTGTGCT GGCCATAGGT TGTTCTTCTT GCTGATTGGC CATGTGTAGT 
TTCCCCACCG CTATGCACAT TGCTGCCGTT GTTGAGATCA ACGAGCAGCT CCTTCCCGCC 
ATGAAGGAGC TCCACGCTGC CCTCAAGGCC AAGCAGGACG CTTTCGAGAA CATCATCAAG 
ATCGGTCGAA CTCACTTGCA GGATGCTACC CCTTTGACTC TCGGTCAGGA GTTCTCTGGT 
TACGTCACCC AGGTTGAGAG GGGTATCGGC CGTGTCGAGG CTACCTTGAA GAATTTGAGC 
ATGTTGGCTC AAGGTGGTAC CGCTGTCGGT ACCGGTTTGA ACACCAGGAA GGGCTTTGAC 
GAGAAGGTTG CTGCCGAGAT CTCAAAGATC ACCGGCTACG ACTTTGTCAC TGCTCCCAAC 
AAGGCAAGAT CTTACCCAGT ATACCTCTTC AATCGCTTTG CTAACATGAC GGCTTGATTA 
GTTTGAGGCC CTTGCCGCTC ATGACGCTAT CGTCGAGGCC TCTGGTGCCC TCAACGTCGT 
CGCTGTCAGC TTCATGAAGA TCGCCAACGA CATCAGGTAC CTCGGATCTG GTCCTCGATG 
CGGTCTCGGT GAACTCGAGT TGCCCGAGAA CGAGCCTGGA TCTTCCATCA TGCCCGGCAA 
GTGAGTACAA CTTGCTCTGC ACGCAGCTTC AGAGACTAAT CATTTTTTTT TGTCTAGGGT 
CAACCCCACC CAGTGTGAAG CCCTCACCAT GGTTGCTGCC CAAGTCATGG GTAACAACAC 
CACCATCTCT GTCGCCGGAT CATACGGCCA GTTCGAGCTC AACGTCTTCA AACCCGTTCT 
CATCAAGAAC CTCTTGCAGT CTATCCGACT CTTGTCTGAT GGTGCCAGGA GCTTCACCAA 
GAACTGTGTC GTCGGTATCA AGGCGAACGA GGACAGGATC AAGAAGATTA TGAACGAGAG 
TTTGATGTTG GCTACCTGCT TGAACAGCAC TTTGGGTTAC GATGGTGCGT CTTTCTCCCC 
ATGATCATAA CAGAGTCATG CTGATGTGCA ACGGTGATAG ACGTCGCCGC CATCGCCAAA 
AAGGCTCACA AGGAGGGTCT CACCCTCAAG GAGTCTACCC TTGCTCTCGG CAAGCTCACT 
TCTGAACAAT TCGACGAGAA GGTCAGGCCT GAGCGTAAGT CATTATTATA ATGTATTGCT 
TGGTATAGTA TATTTTGCTG ATCCATTACC ACTCCAGTCA TGTTGGCTCC CACTGACGCT 
TAAACGGAGA ACTTTTTTTT TCTGGGTAGT TGATGCATTC ATTCATTCT 

 

Protein sequence

MTTPTKTSSL KTTQMLARSL RLTRTLPRVS LASRGFSSTS YIMAEQKFRK EKDTFGDLQV 
PADRYWGAQT QRSLMNFDIG GPTERMPPPL IKAFGVLKKA AAAVNQTYGL PAEVAEHIQK 
AADEVISGKL IDEFPLVVFQ TGSGTQTNMN VNEVISNRAI EMMGGELGSK KPVHPNDHVN 
MSQSSNDTFP TAMHIAAVVE INEQLLPAMK ELHAALKAKQ DAFENIIKIG RTHLQDATPL 
TLGQEFSGYV TQVERGIGRV EATLKNLSML AQGGTAVGTG LNTRKGFDEK VAAEISKITG 
YDFVTAPNKF EALAAHDAIV EASGALNVVA VSFMKIANDI RYLGSGPRCG LGELELPENE 
PGSSIMPGKV NPTQCEALTM VAAQVMGNNT TISVAGSYGQ FELNVFKPVL IKNLLQSIRL 
LSDGARSFTK NCVVGIKANE DRIKKIMNES LMLATCLNST LGYDDVAAIA KKAHKEGLTL 
KESTLALGKL TSEQFDEKVR PELMLAPTDA