Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNC01330 |
Symbol | |
ID | 3256639 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006685 |
Strand | + |
Start bp | 371473 |
End bp | 374174 |
Gene Length | 2702 bp |
Protein Length | 556 aa |
Translation table | |
GC content | 45% |
IMG OID | 638255351 |
Product | polyamine transport-related protein, putative |
Protein accession | XP_569449 |
Protein GI | 58264586 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GACTAGAAGC TTCTACAATT CTACGACATA ACTGCAAATT AACCCAGGCT TCATCAGCAA ATGTTGCTGC TGACCGATGG CACTAATCTA CAGTACAACC TCACGCCCAC CACTGGTTTT TAGGACAAAT ACCGATAGAA ACAGATTCCT CCAAGGACCA CTCTCGCCAA CAATCAACAG TATTAAAGGT CTGGTTACTT ATGGAGAAAG TCGGAGGAAC CCGCAATATC GTCTCCGAAA AAGGCCAATC TTCTATGGAT CACGATTATG ATACAGAATC ATATCCTATT GTCAATTGCG GCAAACCACT GCCCTTCCAG CATAACAAGC GTCGCAGATC ATCTACAGGG GTGGTGGAAA CATCAACACC TGCACCACCA CCTGAAATTG AATTATCGTC CACATCACTG TCCTCTCGCG AAGCACGGCA AGTTATTACG TCCTTCCCTA CCTCTCCTGC CAATCCTATC AACTGGGCAA CCAGAAAGAA ATGGACCATA ACAGCAATTC TTGCATTAAC TGGATTCATT TCCACTGCAG GAAGTTCCAT CGGCGTACCT GGGCTACATG CAGTAATGTC TGAATTCGGA GAGACAAACG AGAAGATAGG AGTTCTAATC GCTGGTGCCT ATGTTCTAGG TCTAGGGTAC GCATTACCAG AAACCATAGA ACGCGTATTA TAAGCTTACC TTTTCTTAAA GAACCGGACC ATTTGTGTTT GCACCAGTGT CGGAGCTCTA TGGACGGCAA ATAGCCTATA TCTCAAGCCA AATATTCTAT GTCTTGTTCA CCTTGGGAAC GGGTTTCACT CAGAGGTTTG TGCTTTGAAT GGCAATAGAT AACTGAAAGC GTCAGACTGA CCAGGGCGTT ACATATAGCA TGACAGCACT TATCATTCTA CGATTGTGAG TGGCCAATTT TGAATATGTA TAACGATTTC TCAAGTTACA ATTCCAGTTT TTGCGGATGT TTTGCTTCTC CTCCGCCATC TCTAGGTGTG GCGACTTGCG CTGATGTGAG CATGACGGCC TTCTAGAATG AAGTCGAATT GCGCTCACCA GTTACCTAGA TGTTCCTACC ACATGAAAGA GGCAAGCCCA TATCATTGTA TGCTCTAGGG CCGATTGTAC GCCTTTTTGA TCACATACTC CGAACCATTA TGACTGACTA ATACATTTTT GCAGGGCGGG CCCATCATTG GCAACATGAT AGGCTACTGG CTATTGTTCG GGGGATGGAG ATGGGCCTAC TACTTTATGA CAATAGTTGC GTTTTTCAAC TTTGTATTGA TGGTCTTTTT CCTCAGGGAG ACCTATGCTC CGTACGTATC TCCTTTCTAA TCCTTTCCCA TAACTCTTGA GACTGACTCG TCATATATCA GTGCTATTCA AAAGATCATG GACTATCAGA TTACTCACCC ACTTTCTCCT TCGACTTCCA GGCGGAGACA TCATCTGCCA AAGTTAACCT GGATGATGGC GATGGTCTCA AAAGAGGACG CGAAAGCAGT CTATGGCAGG GCATTTTCAC GTCCCCCACG ATTGCTGTTT ACCAACCCGG TTGCGTTTGC TTTCTCTTTG TATTACGCTT ATGTGTACGG TAAGGTTATG ATTCTCACTT TGAATAGACC TTATAGAGCT TTTGAAACTG ATCTTCTGCT GTAGGTATAA TCTATCTTTT TTTGGTGGCT TTACCTCTCT TGTACGGCAA GCCGCCATTT AGTCAGCCCG CCTTGTTTTC ATACGAATGG CCTTTGGCCA CAATGGGTTT ACCATACATT TCTATGGGTA TTTTTAAGGC TGTGTTGCAT GGTGTATGGA TCTGATGATG CCGGTTGTAG GCTTGGGCTT CGTGAGTGCG GTGGCCATAG CCTCCCAGTG TCAAGACCGT ATATACAAAC ACTTTTCAAA GATTAATGGT GACAACGGCC AGCCAGAATA TAGAGTATGT TCCGGATGTA GCATTAGATC CCACTAACGG TTCTTTACGC AGCTCGTACT GACTCAAATA GGCATGTGTA TCATGCCAAT TGGACTATTT ATTTTTGTAA GTGCGATGGT TTCAAATTTT TTGATTTGCT AATAACAGTA TTAAAAGGGG TGGACAGCGA ACGCAGAAGT ACACTGGATG GGACCTTTCG TGGGCCAGGC TGTCATGGGA ATTGGGTTGA TGCTAGCATT TAACACCATC CAGAATTTGT TGAGTGGTAG CAATGTATGC TTCGATCATC TCACTGACAC TTGTCCCTAG CTTCGTGGAT GCTTTTTATC CTTACTCTGC TGCAGCCGTA GCCGGGGCAA CTGCTGTAAG TACGGTCCTG CCAGATGGGC GCCGTCGTTA CTGACAAATG GATTTGTTTC GGGGGAGCCA GGCTCGTTCG GTTGTGGCGT GTATCATGCC GCTCTTTACG ACCACCATGT TTGTAAAGCT TGGATGGGGG TGGGGTGGTA CCCTTATCGC CTGTATAGCC ATTGTCGGAA TACCGGCGCC AATGATCGTG AGTAAAGTAG CGTAATATGG TACCTCAAGC AAAGCTGACA TTGATGGCAG ATGTTCTTTT TCGGGCAGAG GTTACGAGAG CGTTATGCCT TCCAAGGGTA GCTTTTGGTA GACCCCTGGT AAACTTTGGA CATAAATGAT GATAAACATT AGGCTCTACA ACATGAGATA TTTGAGAACA GCGCATGAAC TGATGTAAAG TG
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Protein sequence | MEKVGGTRNI VSEKGQSSMD HDYDTESYPI VNCGKPLPFQ HNKRRRSSTG VVETSTPAPP PEIELSSTSL SSREARQVIT SFPTSPANPI NWATRKKWTI TAILALTGFI STAGSSIGVP GLHAVMSEFG ETNEKIGVLI AGAYVLGLGT GPFVFAPVSE LYGRQIAYIS SQIFYVLFTL GTGFTQSMTA LIILRFFCGC FASPPPSLGV ATCADMFLPH ERGKPISLYA LGPIGGPIIG NMIGYWLLFG GWRWAYYFMT IVAFFNFVLM VFFLRETYAP AIQKIMDYQI THPLSPSTSR RRHHLPKLTW MMAMVSKEDA KAVYGRAFSR PPRLLFTNPV AFAFSLYYAY VYGIIYLFLV ALPLLYGKPP FSQPALFSYE WPLATMGLPY ISMGLGFVSA VAIASQCQDR IYKHFSKING DNGQPEYRLV LTQIGMCIMP IGLFIFGWTA NAEVHWMGPF VGQAVMGIGL MLAFNTIQNF FVDAFYPYSA AAVAGATAAR SVVACIMPLF TTTMFVKLGW GWGGTLIACI AIVGIPAPMI MFFFGQRLRE RYAFQG
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