Gene CNC00520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC00520 
Symbol 
ID3256231 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp147579 
End bp149224 
Gene Length1646 bp 
Protein Length428 aa 
Translation table 
GC content49% 
IMG OID638255271 
Producthypothetical protein 
Protein accessionXP_569342 
Protein GI58264372 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGAACAAAGA TTGACTCTTA GAACTTTGGT GGATTGGATG AGAAATAACG ACACTTGATT 
ACTGGATTAT AAAGGTCGAT GCAGATGGCC ACCAAGTATA GAGGGCTTCC GGACATAGTA
CGTATTGCTT GCGAATACCC TTGCACAGAG CTCACGGATC ACCCATAAAC AGGATACTGC
TCCAGATATC TTTGAGACTA CTGATGAGCC AGAGATTGTT CTCAAGCCGG TACGCTTGTA
TTAGTAAAGC ACCACTCATG GATATAACTA ATGTCGGATC TTGTAGAGCG ATGTTAGGTC
AGGAGACGAG GACTCTGTTT TGAAGCCCGT GTCAGAAGAC ATTGACGCCG GTGGGTTACC
CTCCAGGCGT AAAGCTGAGC GCGTCTTTGC TCGGGGTACA AGAAAGCCAG GTAGGTACCT
GAAATTGAGC AATGCCAGAG TAGCTAATCC CGGAATTATG CAGAATTGTC CACTCTCTCC
TTTAGACCTC GACTTCCACC TCTTTCACGC TATGCGTCAT CATCGTCCGA TACCGATGAA
GAGCCACCTT TACCACGGGA GACTCCAGCA GCACGATTGA GACGGTTGAA AGCAGAGCTG
GCCGAGATTG AGGCTGAAGT GGGATCATCG TCCCCTTCCA AAACCCAGTC GATATCACAT
GAAGGGAGCG GAGCAGGAAA GAGGAGGTCT GTTCTTCCGC CGAGGCAACC TGTGGATGTT
GTGTCGGAAT TGGCGAATGT GAGAGAGCGC CTTGAGCGGG TAGAAATTGA TGGATTGGAT
GTTGGGCAGG TCGTGGCAGT GGGGATGGGA CCCAGTTCTG AATGGAGAGA GAGGTTGGAT
AAGTTGGTAA CGGCTGAGAA TCGCTCTGGG AAAGGCAAAG TTGCTCAGTC TACAGCAGTG
GGACAACAAG ATAGCAGTCT GTCCGATATA GACAAACGAC TTGCTGCGCT TGAGCAAGTG
GTTGGACCGA CTACTGACGG ACTGGATCAA GTGTGTTTGC TTTCCTCTTT CCAATATGGC
TTCCCGTTAT AAGCGTTCCG ACTGACACCG AATACTGTAG ACATTGTCGC CTTTAGTTCC
CACACTGAAC AAGCATGACC ATCTCCTCAC TCTACTTACT CAACCTCGGC ATCTCGACGC
CATTTCGCGC CGTGTGAAAC TATTGTTGGT TGACCTTGAC AGGGCTGCTG CTGCTTCAAG
GCGAACAGGT GCAGGTGGAG CGGCAATCCC CCAACAATCA AGCGAAAAAG CAGTTACAAA
CCTCTCCCTG ACGCAAGGCG AATACACTCA ACTTCAATCA TTATTTTCAG TACTGCCGAG
GTTGGACCCT CTCTTACCTA TTCTCACTCC ACTTCTTGCT CGTCTGCGAT CGTTATCGGC
CCTGCATTCT GAAGCGAGCG AGATCGCCGT TTCGCTTCGA GAATTGCAAA GTAGAGATAA
GAAGAATGCA GAAGAAATAA ACGAGCTTGA TGAGGTTGTA AAAAGTGTGC AAACAGGTTT
AGGTGATGCA ATTGCGGCAA TCAAGAAGAA CTGGGAGGGC TTAGAGAAAA GGATGATGGG
CTTAGAGCAA AGGTTGAAGG ACATGGAGCG TCAGATATAG ACCCAGCCAG AATGGAGAAT
ATTCTGCATT GTATATGACT ATACCC
 
Protein sequence
MQMATKYRGL PDIDTAPDIF ETTDEPEIVL KPSDVRSGDE DSVLKPVSED IDAGGLPSRR 
KAERVFARGT RKPELSTLSF RPRLPPLSRY ASSSSDTDEE PPLPRETPAA RLRRLKAELA
EIEAEVGSSS PSKTQSISHE GSGAGKRRSV LPPRQPVDVV SELANVRERL ERVEIDGLDV
GQVVAVGMGP SSEWRERLDK LVTAENRSGK GKVAQSTAVG QQDSSLSDID KRLAALEQVV
GPTTDGLDQT LSPLVPTLNK HDHLLTLLTQ PRHLDAISRR VKLLLVDLDR AAAASRRTGA
GGAAIPQQSS EKAVTNLSLT QGEYTQLQSL FSVLPRLDPL LPILTPLLAR LRSLSALHSE
ASEIAVSLRE LQSRDKKNAE EINELDEVVK SVQTGLGDAI AAIKKNWEGL EKRMMGLEQR
LKDMERQI