| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNC00410 |
|---|
| Symbol | |
|---|
| ID | 3256162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006685 |
|---|
| Strand | + |
|---|
| Start bp | 117792 |
|---|
| End bp | 120474 |
|---|
| Gene Length | 2683 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | |
|---|
| GC content | 46% |
|---|
| IMG OID | 638255260 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | XP_569331 |
|---|
| Protein GI | 58264350 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0252684 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTTGACTTTT GATACCAGTT GTTATCAGTA TCCTTTCATT CTCCTCATCC TAAAAATACC
CTATATTCTC TTTCAAAGCT ATTTCCATTT TGGCCTGCTT GGTCGACCAT CTTTTTCTCT
AAACTCTATC TTGACGAAGG TCGATTCAGC CGTGAAGAAT TGCTGTCAAC CGTCGGCACT
TGGAATATTC AAGCAAGGAA TCTGAGAGAG TCGTGAAAAC CGCTACAGCT CTATTAGCCA
TTCAGGAACT GAGCGGAGAT GTCTTGCCCT TCTGACAACT CAACGGTGAG TACACAATGG
ACGATAATTA CAAAAGATCA AGATCAATTA CTGATTTGAT GTTGTCCATA CTTTTGTTCT
TGCTTCCATC CTCATTCCTG TGCCGTCTAC GACTGGTGAT TATGCTGAAC TACTGTTTGA
ATCTGGGTGA TCGACGATCT CCGCTGGGTG GTATATTAAT GCGGGCATCG ACTATGAATA
GGCTGTGGAT GATGAGTTTT GGAGTTCGGT ACGTCCCTTC ATTTGTATCA ATCTTAAATC
GAGATGATCG ACAAGAGCTG ATCTCGATCT TCTTTCAGGA TGGAATACAT TGGGATGCCC
ACCGTATTGG GTAGGTGTTT CCCATTCCCT GGCACTTGCA AGGCGTCACG ATCCAACGAC
TTGAAAGTTC CAGTGACTAA CATTACCACA CAGATGGGCT GTTGCGGGGG GCTGTGCTAT
CCTCGTAAGC CCTTTTTACT CTCCACTAGA CCTGTATACC TGACAGCCTA TTCAGACAGT
TCTAATTACT CTTTTCACCC TCACCATGCA TGCCACGCGG TACAAGCACC CTCCGGCGCA
AAGACAAGTG ATGAGGGTTC TCCTCATGCC TCCCGTGTAA GTTACTTTCT CGATCTACTG
GCTTCCCAAA CTCTCTCTGT TCTGATTCTC TCTGACCAAT CCCGATCGCA CAGCTATGCC
GTCGTATCAT TCTTCTCATA TCGGTACTAC AAATCCTACG AATACTATAT CCTTGCCGAA
ACGGCATACG AAGCCATCAC ACTTTCTGCA TTCCTCATGC TTCTCATGGA ACTCGTTTCG
ATGGGTACGA TAGACCTGCA GATCAAGTCC GTGCTGGCGG AGAAGGATAA GATGAAGTTT
CCGTATGTCT CTTTGCTTTT CAACTCTTCT TTTTTGTTCC GTTTCTCCTT TGCTAATTAT
CGAAATTGTA GATTCCCATT TGGCTTTTGG CGATTCAGAG CGTCCAAGCC ATACTTTTGG
CATGCACTCA GTTTCAGTGT GATGCAATAC GTTGTCCTCC GACCTTTAAT CTCCATCATT
GGTATCATCT GCGAATACTA CGGCGTCGTA AGTAATCTAG CCCGACCTGT CCGTCCACTC
CCGATCTACG TCTAATAACT CCTTTTGATC TTTCTAGCTA TGTCCGGAAG AGTACTCCAT
CCATTTTGCA GAAGTGTACC TGGACGCGGT CGACTTTGTC TCAATCTCCG TTGCGCTGTA
CGGATTAATC GTTTTCTATG TGCTTTGTAA AGACGAGTTG AAAGGGAAGA AGCCTTTAAA
CAAGTTTCTG GCAATCAAGC TTATCGTCTT CTTCACGTTC TACCAAAGTA AGCTCCGTCT
CGTATAATTT GTATATGGCT GCTCACTCTC CACTTTTTTC TTTTATTTTT ATCACTCCCT
AGGCTTCTTG TTCTCCATCC TCCAAAGTCA TGGGGTCATC AAGGGCACTG CCATGTGGAC
TGCGACCAAC GTTTCTGACG GTCTTTCTGC GCTTTGTACA TGTGTCGAAA TGGTCTTTTT
CAGTGTCTAC ATGGGGTGGG CGTACAACTG GACCGACTAG TGCGTCTCAT CCTACCTCTT
GCGTCGTGAA TGCTTACGTC GTTGCTTGTT CCGAATCATA GTACCGACCC GGAGAAGAAC
CCTTACCAGC GCGACACCAA CTTTAGAACG TACCTGCAAG CCATTTGGGA CACGATCAAC
CTTTCCGACT TTTGCTCTGA AATTTATCTT GCTTGCAAGT TTTTTGTCGA TTACGCTCGA
GGGAAGCCGG GAACTCGTTC GGGTGCTACC AAATTGCAAA AGACGTGAGT CTCTGTTTCA
TTTTCAAAGG CACAAGATTT TTATTTATTT CTTTATTTGC TGACTCGTCT CTTTAGTTTC
ATGCCGCATA CTATTCCAGA GGAGAGTCAA GAAATGGGTA TGATTGCCAG CTACAACGCT
GGAGGCGGGT ACGACAATGA ATACGAACAA GATAAACACA AGCTCCAAAA CAATACCAAA
GGAGGGACAA TCTTCTCCTC AAGCAAGCCT TCAGGGTTGT TGGAAGATAA TGATTCGGGC
GACGACACTT ATGCACCCAT CAGGTCACCG GAGGGTACAG CATATAGTAG AGTACGGGAG
GGGCATGGGA GGGATGAGAG TGCGTTCGAA CCGTGGCCAC AGGAAAGGCC GACGGGACAG
GAGGCGCATC GGCATCAGTT TTAGCCAAGA ATAGAGCTTG GTGGGTTTGG GTCGATGGTA
GAAAAATAAG GGATGGTAGC TGTTTGGAAG AAGAAGATGG AGATCATGGC ATCCCCCGGG
GGGATCCGGA TATTGATACT TTTGGTTGTC TTTCCTCATT CATTGTTTTC TTGACGGACA
TGGGCAAATG GCATACTGCG AAAGTTACTG TATTGCTACA ATA
|
|---|
| Protein sequence | MSCPSDNSTA VDDEFWSSDG IHWDAHRIGW AVAGGCAILT VLITLFTLTM HATRYKHPPA
QRQVMRVLLM PPVYAVVSFF SYRYYKSYEY YILAETAYEA ITLSAFLMLL MELVSMGTID
LQIKSVLAEK DKMKFPFPFG FWRFRASKPY FWHALSFSVM QYVVLRPLIS IIGIICEYYG
VLCPEEYSIH FAEVYLDAVD FVSISVALYG LIVFYVLCKD ELKGKKPLNK FLAIKLIVFF
TFYQSFLFSI LQSHGVIKGT AMWTATNVSD GLSALCTCVE MVFFSVYMGW AYNWTDYTDP
EKNPYQRDTN FRTYLQAIWD TINLSDFCSE IYLACKFFVD YARGKPGTRS GATKLQKTFM
PHTIPEESQE MGMIASYNAG GGYDNEYEQD KHKLQNNTKG GTIFSSSKPS GLLEDNDSGD
DTYAPIRSPE GTAYSRVREG HGRDESAFEP WPQERPTGQE AHRHQF
|
|---|
| |