Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNC00010 |
Symbol | |
ID | 3256733 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006685 |
Strand | + |
Start bp | 1984 |
End bp | 3809 |
Gene Length | 1826 bp |
Protein Length | 570 aa |
Translation table | |
GC content | 52% |
IMG OID | 638255221 |
Product | hypothetical protein |
Protein accession | XP_569349 |
Protein GI | 58264386 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGGTG ACGAGCAGAC GTTCGACGAC AGAATTTTTC GTCGCTATCT TGATCGCTTC ATTCAAGAGA ACTGCAACTA CATGGCGATG GCTACAGAGT TCTCACATCA AGCAAATTTG AAAACGGTCT TCTACGACAG ATATGACAAA GAGTGGGCCA AGCTAGATCT GGTGGATATG TACAGACGGC GGACGGGGAA AATTCTGGGA GCCGTGAGTC ATGGCTTGTG CAAAAGGTGA CACAATGCTT ATTACGCATT CAACATAGCC CTCTCAATCG CAAGGCACCT CCAAATCAAA AAAGGATGTT GCCACTACTC CGGACGCCTC TCTCATCGGC AGCGTCAACG ATCCTAGCTC TCCATCGGGC CGGAAACGGA TGCTTTACGC AGTCATCGAA CTGAAGTGGA TGAACTTAGC GGCTCTACTT ACCGGCGAGG CTAAAAGTCA AACCGACGAG AAAGCTCTTA GTTACCTCTG CCAGGAAGGC GTGTTTCAAA CCATGTGGTA TGTCATCTTG GGCTACGCCA TTTCACGCTG CATCTTCGGC CTCTCCATAG TCAACGAATA TTTCTATAGA ATTGTGTATC TCTATCAAGA CTCGGCCTCA GACAGTCCCG TGCTTGCCCT GGAGGCAAGC AAAGAGTTCT TGGAGAACGC CGGGCGACAT TTTGGATATC CGCGGGATGG TTACTCAGTC GAAGAACTTG CAGAGCTGCA AGACTTTTGG TCGTCGCCTC CCAATTGTCT GATCAGCGAC CGTGCCAACG CCACTTTGAA TAAAGAGACA AGGTATCACC TCGATGCGAC CATCCTCTTG TTCCTCGCTC ATGCAGCGGC ACTTCCAACG CAACGCTTCC TCAACGACCT GCCCCTCCCT TTTGCTCATC ATGTTCCTGT TGATGCGACC GCTCATTCAG CCACCGACAT GAGATTGAAA GGATTAGAAG TTGGGCGCAG GCGACACAGT CTTCGTTCGA CCAAGAGGAA CAAGCGCACA TTGGCGGATT TGTATGATGA AGAGAAAGGT GAAGAGGACA AACCAGGGGA CCAAGAGGAC AAGTCAGGGG ACCGCAAGCC ACCTGGGAAG GATAATCGCA ACAATGATCC TAGGAACGAT GGTTCACAAG GGGGAAACTC TGGCTCCGGA GGCGATAACT CTCGTGGCGG AGGCTCTGGT CCTGGGGGCG ATAACTTACA TGACGGAGGC TCTGGTTCTG GCCGAGGACA TGAAGGCTCC GACTCTCGAG ATGTCGGCGG ATATGAAGGT TCTGAGTCTA GGGATGACGG CAGAGACCCT GTTCGAGATG GCGCCGGAGG CCCCTCTACT CATCGCGCTG AGGCTGCCGA CATTCGAACG CCTACGACAC GACAAGAGTT CTTGAGAGGC CTCCAGAAGC TATCCACTCC TGGAAATATG TTAGACATGA AATCATCCAT TATTGCCTCC CTCATCTCCA ATCCGCGTGA GCACCTTGTA ATCTTATGTT ACAGCCTGAA GTTACGCTTA CGAATTTATT GTAGATACCA GTACTTCTGT GGCTCCCTCC TCTCCCGGAG TTAACTCCAC CACGTCGTCG GAGGATGTTC TTTTCCCGGA TCTGTCATTG GACTCCAATG GCAGAACTCT CGTCCATTGT GATTTGTCCA CCGATCCCCT CCCAAAAGTT CACAAGTCCA CCCCTCTTGA TCTCGATCTC GAGGACATCG ACCCGGAAAC GGGGGAGCTT ACGTTGGCGG CCTATAGGGA CCGCCTCGCA ATGCTGGGGG TACGGGTGAA GTTGGTAACA AGGGAGGAGA TGGACGTCTT GCTGGCGCGG GGATGA
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Protein sequence | MIGDEQTFDD RIFRRYLDRF IQENCNYMAM ATEFSHQANL KTVFYDRYDK EWAKLDLVDM YRRRTGKILG APSQSQGTSK SKKDVATTPD ASLIGSVNDP SSPSGRKRML YAVIELKWMN LAALLTGEAK SQTDEKALSY LCQEGVFQTM WYVILGYAIS RCIFGLSIVN EYFYRIVYLY QDSASDSPVL ALEASKEFLE NAGRHFGYPR DGYSVEELAE LQDFWSSPPN CLISDRANAT LNKETRYHLD ATILLFLAHA AALPTQRFLN DLPLPFAHHV PVDATAHSAT DMRLKGLEVG RRRHSLRSTK RNKRTLADLY DEEKGEEDKP GDQEDKSGDR KPPGKDNRNN DPRNDGSQGG NSGSGGDNSR GGGSGPGGDN LHDGGSGSGR GHEGSDSRDV GGYEGSESRD DGRDPVRDGA GGPSTHRAEA ADIRTPTTRQ EFLRGLQKLS TPGNMLDMKS SIIASLISNP HTSTSVAPSS PGVNSTTSSE DVLFPDLSLD SNGRTLVHCD LSTDPLPKVH KSTPLDLDLE DIDPETGELT LAAYRDRLAM LGVRVKLVTR EEMDVLLARG
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