Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNB05640 |
Symbol | |
ID | 3255769 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006684 |
Strand | + |
Start bp | 1581226 |
End bp | 1584034 |
Gene Length | 2809 bp |
Protein Length | 740 aa |
Translation table | |
GC content | 51% |
IMG OID | 638255206 |
Product | proline-tRNA ligase, putative |
Protein accession | XP_569307 |
Protein GI | 58264302 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0442] Prolyl-tRNA synthetase |
TIGRFAM ID | [TIGR00408] prolyl-tRNA synthetase, family I |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.835718 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GACAGATTCA TGCTCCGTGC CTTCTTCAAG CACTCTAGAG CTTTTATCAC CACACGACAC CATATCCACA CCATGTCCGT CACAGACACC GCCATCCTCG ACCGTCTCGC CCAGCTCCAG ATCGCCCACC CCGATGTCAT CTCCCACGCC CCCGTAAAAG GTGCTGCCGA ATGGAAGGCA GAGCTCACTC TTGCTTCCGC CAACCACGCC ACCACACCTC TCACCAAAAC GCTCCTTTTC AAGCCCAAGA CCGCCAAGAG CGCTGTCCCC ACCCCTGTCA TGGTCCTTGC GCAGGAAAAC ACTGAGACTC CTTCGGGCGC GATCGGTAAA CTCCTCGAAC TCAAGGAACT CCGTCTCGCT TCTGAGGATT TGATCAAGGA AGTCATTCCC TCTGCTGCCA GCAAGGATGA TGTTTCCGCC TTTGCGCTTT CCAATCCTGT GCCTGAGACT CTTCATCTCT TGCTTGATGC TGAGCTCGCC AAGAGCGAAG AACAGCACGC CGTTCACTTG ACTAGCTCTG CTACTACGCT TTTGATCAAG GGAAGCGATA TCAAGGCCTA CCTCGACAGT CTTGTGGAGG GCGAGGGTGT CAAAATTGTT GACTTTGCAG AGTTGAAGGC TTCTGCTCCT GCTCCTACTG AGAAGAAACC CGCTGCGTGA GTCGGTTTCT GAAACTTGGT CATGTAAGAT ACTCCGTTCG CTGATATGTA TATGACAGTC CCAAGGAGGC CAAGGCTGAG ACTTCCACCG CTGCTGCCGA CGATGACCGA TACGAGATGG CTATCCGATT CAAGAAGGAC GAAGACTTCT CCGGATGGTA CACTGATGTA CGTAGACTCG CTGTCCGTGT AGCTGTGGTT AATTTGCACT AACTCCATTT TAAATAGGTC CTTCTCAAGG GCCAGATGCT CGATTACTAT GACATCTCTG GTTGTTACAT TCTCCGTCCC TGGTCTTACT CTATTTGGCA AATCATCCAG AGTATGTACT TTTTCTTGCG CGACATTGAA AAGCTGACAT TCTTCGCTAG ACTGGTTTGA CGACGAGATC AAGAAGCTCG GTGTTCAGGA CTGTTACTTC CCCATGTTCG TCTCTAGTGC TAGGCTCGAA AAGGAGAAGG ACCACATTGA GGGTTTCGCC CCCGAAGTCG CTTGGGTAAC CAAGGCGTAA GTCTCTCGTC ATCTTGAACT TCTTTTTCGA CACATTTCAT TAATCATTTA TGATAGTGGT TCTTCCGACC TTGACGAGCA CATTGCTATC AGGCCTACTT CCGAAACCGT CATGTACCCT TGTAAGTTGC TTCTTTACTT GCGCATCAAA AAAGGCAGCA ATTGACTGAA CGAATTGGCC ATCAGACTAT GCCAAATGGA TCAACTCTCA CCGAGATCTC CCCCTCAAGC TTAACCAATG GAACTCTGTC GTCCGATGGG AATTCAAGAA CCCCCAGCCT TTCCTTCGTA CCCGAGAATT TCTCTGGCAA GAAGGCCACA CCGCCTTCCT CGACAAGGCC GATGCTGACA AGGAAGTTCT CGACATTCTC GATCTCTACC GAAAGGTCTA TGAAGATATC CTCGCTGTGC CCGTCATCCC CGGTAAAAAG TCTGAAAAGG AAAAGTTCGC CGGTGGTGAT TACACCACCA CTGTAGAGGG TTTCATCCCT ACCACCGGCC GAGGTATCCA GGCTGCCACT TCTCACCATT TGGGTCAAAA CTTCTCCAAG ATGTTTGACA TTACCGTCGA GTCGCCAGAC AAGTCTCAAG GTCGATTGTA TGCGTACCAG AACTCGTGGG GTCTTTCCAC CCGTTCGCTG GGTGTGATGG TCATGGTCCA CGGTGACGAC CAAGGTCTTG TCTTGCCTCC CCGCGTCGCC CTTCAGCAGG TTGCGATTGT GCCCGTTGGG TTGAGTAAGG GTGAGGGAAA GAACCAGCCG ATTTATGATG CGTGTTTGAA GTTGGAGAGG GAGTTGGTGG CAGCGGGTAT CAGGGCCAAG GCTGATTTGA GGGATGGGTA CACTCCTGGA TGGAAGTTTA ACGATTGGGA GATGCGAGTA AGTCTTTCTC TATCTTTCCC AAGTTTTGTT CTGTTCGGTT CTTCCGAGTC AATACTAATG CTTTTGGACT TCTTTTTAGG GCGTCCCTCT CCGACTCGAA CTCGGTCCCC GCGACATTGC CAACAACTCT ACTCTTTCTG TCCGTCGATA CGACAACCAC AAGACCCCCA TGCCTCTTTC CGACATTGCC AACACTGTCC GCACCTACCT CGACGACATT CAAAAATCCA TGCTCGACCG TGCCGCCGCA ACATTCAATG ACCGACTCAA GATCGTCACC AACTGGGAAG ACGTCGTTCC CACCCTCGAC GCGAAGAATG TCCTTGTCCT CCCCTGGTGT GAAACCGAGG AATGTGAGGA TGAGATTAAG GAAAAGTCAA AGAGTCTGGC AAACAAGGGT GCGGCGGAAG ATGCCAAGGC GCCTTCGGCG GGAGCCAAGT CGCTTTGTAT TCCGTTTGAC CAAAAGAGGT TCGGTGAGTT CCCGCAGGGA GAGGAGCAAA AATGTGTGCA GTGTGGAAAG AAGGCGAAGA GCTGGACCTT GTTTGGAAGG AGTTATTAAG TTTTCTTTTT TTGCGGGGCC ATTACGTTCC GGGCGAGGGG GTTTGCAAGT AGGACGTTGT AGAGAATCCG GTTTTTTAGA ATGGGGGAGA GCGGGAAGTC TTTTCTTTTT GTGTACAGGG GTAACTGCAA AAGATGCATA GTACTGCAAT CATGAAAATG GCTGGAAAAT GATGATTGAA CCAGCACGGA GTTAGATGG
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Protein sequence | MLRAFFKHSR AFITTRHHIH TMSVTDTAIL DRLAQLQIAH PDVISHAPVK GAAEWKAELT LASANHATTP LTKTLLFKPK TAKSAVPTPV MVLAQENTET PSGAIGKLLE LKELRLASED LIKEVIPSAA SKDDVSAFAL SNPVPETLHL LLDAELAKSE EQHAVHLTSS ATTLLIKGSD IKAYLDSLVE GEGVKIVDFA ELKASAPAPT EKKPAAPKEA KAETSTAAAD DDRYEMAIRF KKDEDFSGWY TDVLLKGQML DYYDISGCYI LRPWSYSIWQ IIQNWFDDEI KKLGVQDCYF PMFVSSARLE KEKDHIEGFA PEVAWVTKAG SSDLDEHIAI RPTSETVMYP YYAKWINSHR DLPLKLNQWN SVVRWEFKNP QPFLRTREFL WQEGHTAFLD KADADKEVLD ILDLYRKVYE DILAVPVIPG KKSEKEKFAG GDYTTTVEGF IPTTGRGIQA ATSHHLGQNF SKMFDITVES PDKSQGRLYA YQNSWGLSTR SLGVMVMVHG DDQGLVLPPR VALQQVAIVP VGLSKGEGKN QPIYDACLKL ERELVAAGIR AKADLRDGYT PGWKFNDWEM RGVPLRLELG PRDIANNSTL SVRRYDNHKT PMPLSDIANT VRTYLDDIQK SMLDRAAATF NDRLKIVTNW EDVVPTLDAK NVLVLPWCET EECEDEIKEK SKSLANKGAA EDAKAPSAGA KSLCIPFDQK RFGEFPQGEE QKCVQCGKKA KSWTLFGRSY
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