| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNB00970 |
|---|
| Symbol | |
|---|
| ID | 3256088 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006684 |
|---|
| Strand | - |
|---|
| Start bp | 291413 |
|---|
| End bp | 292938 |
|---|
| Gene Length | 1526 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | 638254748 |
|---|
| Product | gag-pol polyprotein, putative |
|---|
| Protein accession | XP_569103 |
|---|
| Protein GI | 58263386 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.456464 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CGAGACTGTT TGTACGAAGG TGCTAAGTAA AGACCAGTTC GACAGGTTAT GAGCCTTGCC
TCCCGTCCCT GAATTACTTC ATACCAGCAC AAAAATTCGT CCAGTTCTCG AGCAGCAATA
CCATGTCTGA GCCCAAGGAA GAAACGGCCT CGGCCAAGAT TTCTCCGCTT ATGGGGGAAG
ACAACTATAG TGATTGGAGT TTCGATATCC AAGCCTACCT CCTTGGACTC CGTCTTATGT
CCACTCTTCA TGAAACTCCT GTTCTTCATA TCCCTGTCAC AGTTCCTACC GGTGACCCCA
ACCAATCTCC TCGAGTTCTC ACTACTGATG AGCTCAATAC CCTCAATGCC AAAATTCAAA
ACCAACACCG GGCCTACTCC ATCGTTATTC GATATCTTTC TCCCCAAGTA AAGGCTGCCT
TATCGGCTGA GGCGAAAAAT CTTCTTGAAC CAAATCCCAA ACTACTCTGG GAAGAGTTGA
ACCGATCATA TTCAAAAGCC ACTGGACATA GAGTTGGAGA ACTTTACTCT ATTCTCTGGA
CCACTCGAAT TCCGGAAGGT GCCGATCCCC GTCCCTACCT TGCAACCCTT CGCTCTGCAC
TAGCCCAACT GAAGCAGACA CAGTCTGTTG ATGACCAACA GTGTGCATAT GCCATGTTAC
ATGCTCTACC GGCGAGCTTC CGCCCAATCA AACAACTTCT GTGGGCTCAG ACGAAGTTCT
CCACTTCAGA TGTTATTGCT CAGGTTTCTG GCAAGTGGGT CCGAGCCCAA GGAGATGTCG
CAGAGGAGGC CGGGATGGCC CTATTGGCAC AGTCGAAATC AACAGTGAAT AGTAAGAGAA
GGAAAGAAAA AACGGGGGAC GATGCTGGGG AGAGTCAGTA TTGTATCTGG CATGGTCCAA
ATAGACACTC ATCAAAGGAC TGTTGGGTCG AACAACGTCA AAAAGAAATC AAGGCAGGGA
AGGTAGCCGA AGCTAAGCTA GCCGAGGCTG ACACATACGA GGCGGATGCG TCATCTGCCT
ATTTGGCACA AACCACTGCA CCCAACCTCT CTTCGCCCTC CACCACCTTT GTCATCGACT
CTGGCGCGAC CGACCATATG GTCTCCGATC CCTCCCTCCT GCACGACGTC CGCCATGCCT
CCACGGAACA CATTCGCATC GGCGATGGAT CCCTACTCCC GTCAACCCAA AGAGGCAGTA
TCACCATTCA AGGTGTTGAC TTCCACAATG TCTTAGTGGT CCCTGGTCTT GACCGGAACC
TCCTCTCCGC TCGTAGAACG CCTACCGGTG CGCAGTGGCT TTTCACCCGA CGGGCTGCTC
TCCTGCTCGA TGCCTCTGGT AAAATCCTCC TAGCCTCTGA TTTTTCCGAC AAAGGGCTCT
ACACCCTTCA GGCGAGTTCT CCGTCTGTGT ACCTTGCGTC CACTACTGAC GCCCTGCTAG
ATTGGCATTG TCGCCTAGGA CATCTCAACG TCCGAAGCGT GGCTAAGCTG GCTAGTTGTG
GGTCCAGTCT TCATGCAATG CACTGA
|
|---|
| Protein sequence | MSEPKEETAS AKISPLMGED NYSDWSFDIQ AYLLGLRLMS TLHETPVLHI PVTVPTGDPN
QSPRVLTTDE LNTLNAKIQN QHRAYSIVIR YLSPQVKAAL SAEAKNLLEP NPKLLWEELN
RSYSKATGHR VGELYSILWT TRIPEGADPR PYLATLRSAL AQLKQTQSVD DQQCAYAMLH
ALPASFRPIK QLLWAQTKFS TSDVIAQVSG KWVRAQGDVA EEAGMALLAQ SKSTVNSKRR
KEKTGDDAGE SQYCIWHGPN RHSSKDCWVE QRQKEIKAGK VAEAKLAEAD TYEADASSAY
LAQTTAPNLS SPSTTFVIDS GATDHMVSDP SLLHDVRHAS TEHIRIGDGS LLPSTQRGSI
TIQGVDFHNV LVVPGLDRNL LSARRTPTGA QWLFTRRAAL LLDASGKILL ASDFSDKGLY
TLQASSPSVY LASTTDALLD WHCRLGHLNV RSVAKLASCG SSLHAMH
|
|---|
| |