Gene CNB00680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNB00680 
Symbol 
ID3255974 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006684 
Strand
Start bp196410 
End bp196970 
Gene Length561 bp 
Protein Length69 aa 
Translation table 
GC content47% 
IMG OID638254721 
ProductDNA-directed RNA polymerases i, ii, and iii 8.3 kda polypeptide, putative 
Protein accessionXP_569077 
Protein GI58263334 
COG category[K] Transcription 
COG ID[COG1644] DNA-directed RNA polymerase, subunit N (RpoN/RPB10) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.0591881 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTACGTC TAGATGATGG GCATGTTACT GTCTGATGCT GACTTTTATG GTGCTGTAGA 
TTATTCCCGT CCGTTGCTTC TCCTGCGGTA AGGTCATCGG TAACCTTTGG GACAGCTACC
TTGAGCTCCT CGCCGCCGGT GTTGATGAGG GGTGAGTCAC AGGGTTAAAT GGCTGCGTAG
ACGTTTGCTC ATAGATGAAC GTATAGTGAG GCGATGGACA AGTTGCAATT GTGAGCAAAG
GCTTTTAAAG GACTGGGAAA CGTAGCGGTC GGATGGACGC TGATATATGG TGCAATTGTA
GGAAGCGATA TTGCTGTCGA CGAATGGTCC TCACCCACGG TATGTCTCTT CCTGGCAGAT
GCAGTATGAG CCATTGCTAA TGATTATGCA GTGGATCTTA TTGAAAAGTT GCTGATGTAC
AACCGTTCGT CACCTCGTCT TCTCAAACAA CAGATGCTGA TCAAAGCTGA TATCGCTTCA
CAGCTCTCGC ACGGGATCGA TAGATATAAC TTTCCCTTTC CTCGGTACTT CGGCTGTAAT
TTATGTATAT CATCAACATT T
 
Protein sequence
MIIPVRCFSC GKVIGNLWDS YLELLAAGVD EGEAMDKLQL KRYCCRRMVL THVDLIEKLL 
MYNPLARDR