Gene CNB00170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNB00170 
Symbol 
ID3255618 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006684 
Strand
Start bp52259 
End bp54169 
Gene Length1911 bp 
Protein Length529 aa 
Translation table 
GC content50% 
IMG OID638254669 
Productexpressed protein 
Protein accessionXP_568759 
Protein GI58262698 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0350472 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCATCCTTCA ATGTCTACTT TGTAAATATT TATAATCCCC ACATCTACCC AGGAAGCGTC 
AATGCTTCGC CGTAACTACA CCCCGACACC ATTAGGCTAC GCCATCTTAA CTTTTTTCGC
CCTAATCGCT CTTTACTTTC TCACACCCGC CGACACATCC ATCTCTCTCC TGCCATCCTC
ATGGTCATCC CAGTCTGATA CATGGGCAAC ACCACACGAA CCTATCGGAG AAGAAGAAGA
CGAGCTCGAT AACCGGCCGC TCCCGCTTTT ACCAGAAATC TACTCTTCCG AATTCCCCGA
CCTGAAACTC CCCGCATCTC TACTTGCCTC ACCGAAGCTC TACCCTCTGA CCTCTCGCCT
CGTAACGTTC CTCTCCCGAC CTATCCTTTC TCATTCGGCT GCATCGCCAG CAAATCTGGA
GGGTTGTCCA TCGGAGCTGA GTGATAAGCT TGTGAACCCT GATCAGTATG CCGGTGATGG
TCCATTCTGG AGAGACGATG TTGATGAAGC GGAAATTGTG AGACGACGAG CAGATGTTGT
TAGGTACTTG AGTGAAGCAG TAGAGAAGGG TGAACAAGTG CTGGGTCAGG AAGGAAAGAC
AGGAAAGGGG AGAGGGATCG TTTTGACAGG TGGTAACCAA GTATGTCATC GCTTTAGTAT
TGCTGGCGGT AAAGAATAAT CATCGCTGAT GGCAGAACAG GACACCACTC TCCGGACAAT
CACTGCTATC AAGCATCTTC GAAGGCTAGG CGTCAAACTC CCGATCGAAG TGTTTCATTA
TTCGGACGAG CTTCATAATA AACAGCAGCG AAAAGAGATT GAGTCGCTTG GAGCGACATT
GAGAGAGGCA AAGGGGCTTG AAAAGGTTGC CGGTGTATGG AAAGTGAGTC GCCCGTTTCG
TACCCTTACA AGGAGCATTC CTGACCAATC TCGTCACACA GAACTGGCAA ATCAAAGGCC
TCGCTCTCGT TCAATCTTCG TTCCGTGAAA TTATCTACCT CGACTCTGAT AACACCCCGC
TTCGCTCCCC TTCTCACCTG TTCGATGCCC CCATCTACAC TTCCTCTGGT CGAGCTGCAT
TCTGGCCTGA TCTCTCCAAA GACCATCCCG ACAACGCCAT TTGGCGCCTG GTAGGCGAAA
CATGTTCCTT GGATCTCTGG ACATTCGAAA GTGGGCAGAT TGTGGTGGAC AAAGCGGGTA
ACGAAGGGAT GAACCTTGCG GCTCTTATTA TCGCTGCTGG GATGATGAGG GATAGGGATT
TTTGGTTCCA TATGTGCGGA GGGGATAAGG ATACGTTTAG GTGGGCGTGG AGGATGTTGG
ATATCGAGTT TGGGGTATCG CCAAGGTGGA TGAGTACAGT AGGAATTCGA AATGAATTCC
AGAACGGACG TTTTTGCGGA CAGTGAGTCG TCTGTCGACC CGTCATTATT TACAAGTGTC
TCTAACTACT TTGACTCATC TAGCTCTGTA CTCCAATACG ACCTCGCGAC ACCTGTAGGT
TTCTCCCGCC CACCGCCACT CTTTGTCCAC TCCAATCTAC TCAAACATCT CGGCGGAGCG
GGCCTCTCAA AAGGCAAACT TTTCAAATTC ATCCGCCGCA TGTCGGAAGA CTACTCTAGT
TCACCAGCAC TCAACCATGC GCACTCTTTT GTGTATGATG GGATTGCAAG AGGGATGTGT
TTGGATTTGG ACTGGCACGA GGATACACCG CAAGAGGTGA AGGAAGATGT GAGAGTGGAG
ACTTATGCGG TGGGGCAGGA GGAAGGCGGG GTGTTTGATG GATTTGAGGA TGCATGGTGG
GAAGAAGGAG GACGTGTTGG AGGGTGGTAA AACATAGAAC GAGGAGCGAA GAAGTGCATC
TCATTCTTTT AGATAGCGTA TGTTGTTATT CCCGGATGAT CTTGTACCAA T
 
Protein sequence
MLRRNYTPTP LGYAILTFFA LIALYFLTPA DTSISLLPSS WSSQSDTWAT PHEPIGEEED 
ELDNRPLPLL PEIYSSEFPD LKLPASLLAS PKLYPLTSRL VTFLSRPILS HSAASPANLE
GCPSELSDKL VNPDQYAGDG PFWRDDVDEA EIVRRRADVV RYLSEAVEKG EQVLGQEGKT
GKGRGIVLTG GNQDTTLRTI TAIKHLRRLG VKLPIEVFHY SDELHNKQQR KEIESLGATL
REAKGLEKVA GVWKNWQIKG LALVQSSFRE IIYLDSDNTP LRSPSHLFDA PIYTSSGRAA
FWPDLSKDHP DNAIWRLVGE TCSLDLWTFE SGQIVVDKAG NEGMNLAALI IAAGMMRDRD
FWFHMCGGDK DTFRWAWRML DIEFGVSPRW MSTVGIRNEF QNGRFCGHSV LQYDLATPVG
FSRPPPLFVH SNLLKHLGGA GLSKGKLFKF IRRMSEDYSS SPALNHAHSF VYDGIARGMC
LDLDWHEDTP QEVKEDVRVE TYAVGQEEGG VFDGFEDAWW EEGGRVGGW