Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNB00170 |
Symbol | |
ID | 3255618 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006684 |
Strand | + |
Start bp | 52259 |
End bp | 54169 |
Gene Length | 1911 bp |
Protein Length | 529 aa |
Translation table | |
GC content | 50% |
IMG OID | 638254669 |
Product | expressed protein |
Protein accession | XP_568759 |
Protein GI | 58262698 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0350472 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CCATCCTTCA ATGTCTACTT TGTAAATATT TATAATCCCC ACATCTACCC AGGAAGCGTC AATGCTTCGC CGTAACTACA CCCCGACACC ATTAGGCTAC GCCATCTTAA CTTTTTTCGC CCTAATCGCT CTTTACTTTC TCACACCCGC CGACACATCC ATCTCTCTCC TGCCATCCTC ATGGTCATCC CAGTCTGATA CATGGGCAAC ACCACACGAA CCTATCGGAG AAGAAGAAGA CGAGCTCGAT AACCGGCCGC TCCCGCTTTT ACCAGAAATC TACTCTTCCG AATTCCCCGA CCTGAAACTC CCCGCATCTC TACTTGCCTC ACCGAAGCTC TACCCTCTGA CCTCTCGCCT CGTAACGTTC CTCTCCCGAC CTATCCTTTC TCATTCGGCT GCATCGCCAG CAAATCTGGA GGGTTGTCCA TCGGAGCTGA GTGATAAGCT TGTGAACCCT GATCAGTATG CCGGTGATGG TCCATTCTGG AGAGACGATG TTGATGAAGC GGAAATTGTG AGACGACGAG CAGATGTTGT TAGGTACTTG AGTGAAGCAG TAGAGAAGGG TGAACAAGTG CTGGGTCAGG AAGGAAAGAC AGGAAAGGGG AGAGGGATCG TTTTGACAGG TGGTAACCAA GTATGTCATC GCTTTAGTAT TGCTGGCGGT AAAGAATAAT CATCGCTGAT GGCAGAACAG GACACCACTC TCCGGACAAT CACTGCTATC AAGCATCTTC GAAGGCTAGG CGTCAAACTC CCGATCGAAG TGTTTCATTA TTCGGACGAG CTTCATAATA AACAGCAGCG AAAAGAGATT GAGTCGCTTG GAGCGACATT GAGAGAGGCA AAGGGGCTTG AAAAGGTTGC CGGTGTATGG AAAGTGAGTC GCCCGTTTCG TACCCTTACA AGGAGCATTC CTGACCAATC TCGTCACACA GAACTGGCAA ATCAAAGGCC TCGCTCTCGT TCAATCTTCG TTCCGTGAAA TTATCTACCT CGACTCTGAT AACACCCCGC TTCGCTCCCC TTCTCACCTG TTCGATGCCC CCATCTACAC TTCCTCTGGT CGAGCTGCAT TCTGGCCTGA TCTCTCCAAA GACCATCCCG ACAACGCCAT TTGGCGCCTG GTAGGCGAAA CATGTTCCTT GGATCTCTGG ACATTCGAAA GTGGGCAGAT TGTGGTGGAC AAAGCGGGTA ACGAAGGGAT GAACCTTGCG GCTCTTATTA TCGCTGCTGG GATGATGAGG GATAGGGATT TTTGGTTCCA TATGTGCGGA GGGGATAAGG ATACGTTTAG GTGGGCGTGG AGGATGTTGG ATATCGAGTT TGGGGTATCG CCAAGGTGGA TGAGTACAGT AGGAATTCGA AATGAATTCC AGAACGGACG TTTTTGCGGA CAGTGAGTCG TCTGTCGACC CGTCATTATT TACAAGTGTC TCTAACTACT TTGACTCATC TAGCTCTGTA CTCCAATACG ACCTCGCGAC ACCTGTAGGT TTCTCCCGCC CACCGCCACT CTTTGTCCAC TCCAATCTAC TCAAACATCT CGGCGGAGCG GGCCTCTCAA AAGGCAAACT TTTCAAATTC ATCCGCCGCA TGTCGGAAGA CTACTCTAGT TCACCAGCAC TCAACCATGC GCACTCTTTT GTGTATGATG GGATTGCAAG AGGGATGTGT TTGGATTTGG ACTGGCACGA GGATACACCG CAAGAGGTGA AGGAAGATGT GAGAGTGGAG ACTTATGCGG TGGGGCAGGA GGAAGGCGGG GTGTTTGATG GATTTGAGGA TGCATGGTGG GAAGAAGGAG GACGTGTTGG AGGGTGGTAA AACATAGAAC GAGGAGCGAA GAAGTGCATC TCATTCTTTT AGATAGCGTA TGTTGTTATT CCCGGATGAT CTTGTACCAA T
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Protein sequence | MLRRNYTPTP LGYAILTFFA LIALYFLTPA DTSISLLPSS WSSQSDTWAT PHEPIGEEED ELDNRPLPLL PEIYSSEFPD LKLPASLLAS PKLYPLTSRL VTFLSRPILS HSAASPANLE GCPSELSDKL VNPDQYAGDG PFWRDDVDEA EIVRRRADVV RYLSEAVEKG EQVLGQEGKT GKGRGIVLTG GNQDTTLRTI TAIKHLRRLG VKLPIEVFHY SDELHNKQQR KEIESLGATL REAKGLEKVA GVWKNWQIKG LALVQSSFRE IIYLDSDNTP LRSPSHLFDA PIYTSSGRAA FWPDLSKDHP DNAIWRLVGE TCSLDLWTFE SGQIVVDKAG NEGMNLAALI IAAGMMRDRD FWFHMCGGDK DTFRWAWRML DIEFGVSPRW MSTVGIRNEF QNGRFCGHSV LQYDLATPVG FSRPPPLFVH SNLLKHLGGA GLSKGKLFKF IRRMSEDYSS SPALNHAHSF VYDGIARGMC LDLDWHEDTP QEVKEDVRVE TYAVGQEEGG VFDGFEDAWW EEGGRVGGW
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