| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA06920 |
|---|
| Symbol | |
|---|
| ID | 3253702 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006670 |
|---|
| Strand | + |
|---|
| Start bp | 1884512 |
|---|
| End bp | 1886307 |
|---|
| Gene Length | 1796 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | 638253014 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_567009 |
|---|
| Protein GI | 58259193 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG5231] Vacuolar H+-ATPase V1 sector, subunit H |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.17206 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TGGCTATAAC CATTCGAGCA GTAGTAAAGT ACGAGACAAC ATGGCCACGA CTGTACACCC
TATTCCACCT CCCTTCTTCT CCCCTTACCT AGATGACCAG TGCAACAAGA TCAACGCTAA
ACCTGTTCCG TGGGAGGTAA GCTTGCTCGT ACGTGGGTTC GGTATAGGCT GACATCGGTT
CGCTGTGCAG GGTTACCAGA GGGCAAAGCT TCTTTCAGCA GATGAACTTT CACTTTTGAA
GTCTCTCAGC AAGCTTGTAC GTCGCCCGAC ATTATTGTTA ATTTACTGCC ATTAACAGAT
AACATAGCCC TCCGCTCAAC GACCTACGGT ACTGGCTACT CAAGGGCCTC AGTATGCTAA
GCTTTACATC GACTTACTTC GAAAGCTTCA AAGAGTAGAT ACCGTTCAGG CGGTGCTTGT
ATCTATCAGC GACATGCTCG CTGACAACTC GACCATCCCA TACTTTCACA ATCTTGCATC
GCCGGAGCAC CCTGACGATC CTTACGGGCC TATCGTCAAG TGTTTGAGTA TGGATGAAGA
ATTTCCTGTC TTGGGAAGCC TGAGGATATT GTCACTTTTG ATTGCGTGAG ATTGTCCTGG
GAAAGCATGG CAAAAAGCTA ATGTAGATTC CAGCACCGAT CCCAAGCCCT TCCCCAACGA
CCTCGTTCCC ACTTTACTCT CATCCCTCCA AAAGCTCTTA AACGGCAGTC GATTGCCTCT
ATGGGAAGTT GCAGCCCAGG TCCTCGGTGC TGTTCTCGGG ACTAAACAGT TCAGGAAGTT
CGTATGGAAT GAAGAAAATT GCCTCTCAGG GTGTGTCTAG GAGTTCAGCC ATCTTTGTGT
CAAGCTAATC GGCGGGGGTA GGCTTATCAA ATCTTTGAAG ACGAACCCCA ACCCCCAAGC
GCAATATTGG GCTATCACTT GTCTTTGGCA ATTGTCGTTC GAGAAAGAAG TGGCGGAGAA
CTTGGACAAG AAGTATGATG TCGTGGCGAT CCTGACCGAT ATAGCTAAGG CTGCGGTGAA
AGAAAAAGTC ACTCGGGTTG TAGTGGCTAC TTTCAGGGTA AAACCAAATC GTTCAATATA
TGTCCATAGC TGACAAGGAC AACTTAGAAC CTACTCGCCA TCGCGCCTTC CCAGAACCTT
CCTTCCATGT TTGTTACAAA ACTGCTACCC TTCATTGTTT CTCTTCAGTC GCGTAAATGG
TCCGATGAGG AGATTGTTGA AGACCTTGAC TACCTCAAGG ATGAGCTCAA GTCTCGCTTG
GATGGGCTTA GCACCTATGA CGAGTACGTC AAGGAGCTTG AGAGTGGTCA TTTAGTCTGG
TCACCTGCAC ATGAGACGGA TGACTTTTGG AAGGAGAATG GAATTAGGAT TGGGCAGGAA
GAGGGCGGGA AGGCGGTCAA GTCAGTAACA GAGTTCATCT TGATTTGAGC CTTTGCTGAC
ATGACAGCAG GCGCTTAGTC GAGCTTATCA CGACAAGTAA AGATCCTCTT GTTCTTGCTG
TTGCCACGCA TGATATCGGT CAGTTTGTCA AGTACGGTGG TGACCGATCT AAACAGTATG
TATATCACTT TGTTGTTCAG TGCCTATCTA ACATATACAT AGAATCATCG ACAACCTGCA
CGGCAAGACG CGTGTGATGG AACTGATGAG CCACGAGAAT GCGGACGTAA GGTATCAGGC
GTTGATGACG GTGCAGAGAT TGATGAGCCA ACACTGGTCA AAGTAATTTG GAAATGAAAT
CATCAAACTA GTTTGATCAC ACCAGAGTTG TAAAGCATGT ATGGAAACAT TTAGAC
|
|---|
| Protein sequence | MATTVHPIPP PFFSPYLDDQ CNKINAKPVP WEGYQRAKLL SADELSLLKS LSKLPSAQRP
TVLATQGPQY AKLYIDLLRK LQRVDTVQAV LVSISDMLAD NSTIPYFHNL ASPEHPDDPY
GPIVKCLSMD EEFPVLGSLR ILSLLIATDP KPFPNDLVPT LLSSLQKLLN GSRLPLWEVA
AQVLGAVLGT KQFRKFVWNE ENCLSGLIKS LKTNPNPQAQ YWAITCLWQL SFEKEVAENL
DKKYDVVAIL TDIAKAAVKE KVTRVVVATF RNLLAIAPSQ NLPSMFVTKL LPFIVSLQSR
KWSDEEIVED LDYLKDELKS RLDGLSTYDE YVKELESGHL VWSPAHETDD FWKENGIRIG
QEEGGKAVKR LVELITTSKD PLVLAVATHD IGQFVKYGGD RSKQIIDNLH GKTRVMELMS
HENADVRYQA LMTVQRLMSQ HWSK
|
|---|
| |