| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA06210 |
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| Symbol | |
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| ID | 3253679 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006670 |
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| Strand | - |
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| Start bp | 1678348 |
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| End bp | 1682461 |
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| Gene Length | 4114 bp |
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| Protein Length | 1152 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | 638252942 |
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| Product | Pol II transcription elongation factor, putative |
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| Protein accession | XP_566970 |
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| Protein GI | 58259115 |
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| COG category | [K] Transcription |
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| COG ID | [COG5164] Transcription elongation factor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CACATTCTTC TTCCAGAGGC GAGCTAGTGA TATGTCTGAC ATCGAAATAA AAAGTTCGCC
GCCTGAGTCA CCTGCAGAAG AGCAGGAGGA AAGAAGGTTA GCCGGGAGAA AGAGGGTAAG
TAGGAATATC AAGACAGGTG TATGCGTGAC AAGCTGATGG TATCTAGGCA AGAGCAGTGG
ATCCTGACGG TAGGAATTTG TTCAATAAAA GCTTTTCCAT CGCTGATTGT CAATTGATTG
ATTGATGAGT AGAAGAGGAC GATGTTGGTT CATTCACTTT TAATTTCCAT CGCTCTCGCG
CTCACTGTCC GTTGTAGGAT ACTCAGGTCG TAAATAATCA GGATGAAGAG AAAGACCCAA
AGGAAGATGA TGGGGAAGAG GGAGGTAACG CTCAAGCGGA AGGGGCTGAC GAAGGTGAAG
ATGACGAGGA CGAGGATGAG GACGATGATG ACGATGACGA GGACGAAGAT GATGAAGATG
ACGATGGAGG TCAGTGCTGA ACGATCTGGC AAGGATATGG GCTAAAGATC TTGTTAGAGC
GACGTGCAAA GCGACGCAGG AAGCAGAAGA AGTTTAGATT CTTGGATGTC GAAGCCGAAG
TAGACGACGA GGATGAAGAA GAAGATGAAG ACAACGATTA TGGAGACGGT AGGCTTATTT
TCATAAACTA TAAAGATCTT TGCTCATATT ACATCCAGTT GCTGAGTTCA TTGATGAGGC
GCCTGAGGAT GTTGGAGCTC GGGATGATCA TCAACATCGC CGACTTAATC GTGTCTTTGG
ACGTAACGAA GAGGAGGATG TGCATGATAT TGTACAGAGA TTGAAGGAGA GGCATGCCGG
TGCAGCGAGG TATAACGGCG ACAGTGACGC AGTCCCGCAA AGGCTGCTTA TGCCTGGTGT
CAATGATCCA AGCTTGTGGA AGGTGGTTGT CAAGGTTAGT GTTTCTCAAA CGGACTGCAA
TTCATTCCTT ATACCTGGTA TTGTAGTCCG GCCGAGAACA CGCTATCTGT GCCTCAATTT
TCCGAAAGGT TTTTGCACAA CAGTACTCTG CAAACCCCAT CGATGTCATT TCCGTCTTCT
GCCGCGATTC CATTCCAGGG ATGATCTTCA TCGAAGCCCG CCAGTCCGCC TCTGTGAGCG
CCGCTGTTAA TGGCATTGTC GGCATATTCA TGTCTAGGGG CGTCAACCTC GTTCCCATTG
AGGAGATGGC ACCTTTGCTC AAGATGAAGA AGAAAGATGT CAATCTCACA CCAGGGATGT
GGGTAAGAAT GAAGAGGGGA AAACACGCGG GTGACTTGGC GCAGGTGGTG GATGTTGACC
AGATCACGAG CGGTGTCGTT GGTATAAAGT TTATTCCTCG CATCGATCTC ACGCCTCGAG
AAAAGAGGAA GGAACGCATT GCCATTGGGA AGCCCGGTGG TGTTCGCCCG CCAGCTCGTC
TTTTCGCATA TGACGACGTA CGAAAGATCT ATGGACGACA GAGTGTGCGT CAAGGCGCTC
AAGGCAGCTA TCTGTTCGAT AACGACGAAT ACGTCGACGG GTTCTGTATC AAGGATGTCA
AGATCCCTGC AGTTGCGACG GAGGATGTCA ACCCTACCCT TGAAGAGATC TCACGTTTCA
CCGGCGACGA TGATTCCACA GCCAAATTCG ATCTTTCTGC TATTGCGGAC GCCAACAAGA
ACCTCTCGAC ATCTCTCCTT TTCCCTGGTG ACAAGATTGA AGTTTATGAA GGCGAGCAGA
CAGGGCTGTA CGGTATTGTA GAAGCCGTGT CTCCCGACGT CATTGCTATC AAGGCGGAGG
GTGGAGAGGT CCATGGCCAG ACTGTTGAGG TTCCTGCACG AAGTGTTCGG AAACGCTTCG
ATGTTGGTGA GCATGTCAAG GTGCTGGGAG GAAAGCATAC AGATGCGTCG GGTATGGTGG
TGGAAGTCAA GGGAGACATT GTGACTTTGA TGTCTGACCT GGGCGAGCAA GAGATCAAAG
TTTTTTCTAA GGATCTTCGA AAAGCCGCAG ACACCACCAA TCTTACCGTT ACGAAAGGTT
TATATGACGT TCACGACATG GTGATGTTGG ATTCAACAAC GGCGGGGGTA GTGACCAAGG
TGGAAGGAGG GTTGTTGAGG ATCTTGGATC AAAACGGTGC TGCGAAGAGT GTTTCACCTG
AGCAAGTCTC AATAAGAAGG GACAACAAGC GTTTTGCTGT CGCCACAGAT TCTCAAGGAA
ATGACATGAA AGTTGGTGAC AACATGAAGG AAACTGATGG GGAGGTGAGA TTTTTATTAC
GGATGGACAA TGATTTGGGT TGATCCATTT TGTACAGATG CGACAAGGAG AAGTCTTCAA
CATCTTCCGC TCCATCTTTG TGTTTCTCTA TAACCGCGAA TACACCGACA ACTTCGGTGT
TTTCGTTGCT CGTGCCAACT CCCTTATATC GGTTACTCCC AAATCAGCTG TTAACGACCT
CACCAAAATA AATCCAGCAC TTAATCAACA GCTTCCTTAT GGCGGTGCAA GTCTTATGCC
AGCTCCCACG GCAAATCTCA ACAGGAACAG ACTCATCAAC ACTCTTGTGG TTGTGACAAA
AGGGACGAGT AAGGGATTGA TTGGTGTCAT CAAGGACGTA CAAGGTGAAA ACGCAAGAGT
CGAGCTGAAA CATAACAATA AGACCCTCTC AGTCAACCTC GCTTCGCTCA AGAGAAAAGA
GTATGTGTCA TTAATTGCTA TGCGTTCTGG TGTCCTCTAG GCTAATGGTT TATAGCCAAA
AAACTGGTGC GACCTTCCCT TTGGAAATGG CTGGAATAGC TTCTGCGGCT GGTGGTTATG
GCGCTCGTCC AAATGCTGGC CAATACGATA TCAACCCGTA CGGTGGTGCG ACAGCTATGC
ATCCCTCGAT GGTGAATATA ATTGTTTTTT ATATATATCC CAAGTGCGGG CTGATTTTTT
GGGTAGGGCG GGCAAACTCC GGCCTTGATG GGCGGAAGAA CACCAGCTGC ACGCTTTGGA
CAGACACCTA ACCCATACGC TGTGAGTATT GATTGACTAA GACGCCATGA AATGAGTTGT
GGTTGATACA ATGGCAGGCT GGCGTACAAA ATGGCAAAAC GCCCAACCCT TATGCGGCAG
GCGTTGGGGG CAAGACACCA TCAGCGGCCA ACGCCTCCGG CGGGAAGACT CCTGCGTGGG
GCGCTTCTGG AGGCAAGACA CCTGCATACG GTATGGCATC CGGAGGTAAA ACCCCAGCAT
ACGGCATGCA AGGTGGCAAG ACCCCCAACG CATATGCCAT GGCTCCTCCC GGTCCCTCTG
GTGGTCGAAC GCCGGCATAT GGAGCTTACG GTCGACCTGA GGCAAGTGGT TCCAGGCCCA
GCGTTATGGC TCCTCCGTCT GCGCCTTACA GTGCCCCGTA CAGTGCACCA ACGCCAGCAG
GTAATGGAGC ACCGACACCT GCTATCCCGG GAAACCCTTA CACAGCTCCA ACGCCTTATG
GTGCACCCAC TCCCTATGCT GCACCGACTC CCGGTATGCC TTCTCTTTCA GCCCCTACAC
CTGGACCGGG CGCTGGTATT GCGCCTACAC CGTTTGGGGC TCCGACACCA TATGGAGCTC
AAAGCTACGG TGCTTCTGCT CAGCAGCAAC GAGGTAGGTT TGCGTACCCC AGCCTTGCTT
ATAAAATACA CATTGCTCAC GTGACTGCTT AGGTCTCCCC TGGGATTGGG CCCTCGACTT
CAGAAACGTT ATCGTGGAAA TCGGTCCTTC CTATCGTCCC GGGTCTCGTA ACCCTTTGCA
TTTCAAGCGA GGATTCTTTG ACGGGAAACG ATTTGGCTAC AACGACATCA TTGGCGAAAA
CGTGCGGGCG ATACTCTTGG ATGACCCGTC AGTCGTAGAA GAGATACCTG CAGAATATCT
CCGTCCAGCC AAGGCGGACA GTCAGGGACA AGTCGTGGTT GTCATTGGTG GTGGACCAGA
ACAAAAGGGT CAACAACGGA CAACTCAATA TGAGAATGGA GGGTCTTGGA TGATGGAGCT
GGAAGGGGGC GATATGGCGC CTTTGGTCGT CGACGGCGCA GACTTGTGTA GGATTTGGAA
AGTGTAGGGT TATCTGTTGT GTTCGTGAAA TCTG
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| Protein sequence | MSDIEIKSSP PESPAEEQEE RRLAGRKRAR AVDPDEEDDD TQVVNNQDEE KDPKEDDGEE
GGNAQAEGAD EGEDDEDEDE DDDDDDEDED DEDDDGERRA KRRRKQKKFR FLDVEAEVDD
EDEEEDEDND YGDVAEFIDE APEDVGARDD HQHRRLNRVF GRNEEEDVHD IVQRLKERHA
GAARYNGDSD AVPQRLLMPG VNDPSLWKVV VKSGREHAIC ASIFRKVFAQ QYSANPIDVI
SVFCRDSIPG MIFIEARQSA SVSAAVNGIV GIFMSRGVNL VPIEEMAPLL KMKKKDVNLT
PGMWVRMKRG KHAGDLAQVV DVDQITSGVV GIKFIPRIDL TPREKRKERI AIGKPGGVRP
PARLFAYDDV RKIYGRQSVR QGAQGSYLFD NDEYVDGFCI KDVKIPAVAT EDVNPTLEEI
SRFTGDDDST AKFDLSAIAD ANKNLSTSLL FPGDKIEVYE GEQTGLYGIV EAVSPDVIAI
KAEGGEVHGQ TVEVPARSVR KRFDVGEHVK VLGGKHTDAS GMVVEVKGDI VTLMSDLGEQ
EIKVFSKDLR KAADTTNLTV TKGLYDVHDM VMLDSTTAGV VTKVEGGLLR ILDQNGAAKS
VSPEQVSIRR DNKRFAVATD SQGNDMKVGD NMKETDGEMR QGEVFNIFRS IFVFLYNREY
TDNFGVFVAR ANSLISVTPK SAVNDLTKIN PALNQQLPYG GASLMPAPTA NLNRNRLINT
LVVVTKGTSK GLIGVIKDVQ GENARVELKH NNKTLSVNLA SLKRKDQKTG ATFPLEMAGI
ASAAGGYGAR PNAGQYDINP YGGATAMHPS MGGQTPALMG GRTPAARFGQ TPNPYAAGVQ
NGKTPNPYAA GVGGKTPSAA NASGGKTPAW GASGGKTPAY GMASGGKTPA YGMQGGKTPN
AYAMAPPGPS GGRTPAYGAY GRPEASGSRP SVMAPPSAPY SAPYSAPTPA GNGAPTPAIP
GNPYTAPTPY GAPTPYAAPT PGMPSLSAPT PGPGAGIAPT PFGAPTPYGA QSYGASAQQQ
RGLPWDWALD FRNVIVEIGP SYRPGSRNPL HFKRGFFDGK RFGYNDIIGE NVRAILLDDP
SVVEEIPAEY LRPAKADSQG QVVVVIGGGP EQKGQQRTTQ YENGGSWMME LEGGDMAPLV
VDGADLCRIW KV
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