| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA05010 |
|---|
| Symbol | |
|---|
| ID | 3253358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006670 |
|---|
| Strand | + |
|---|
| Start bp | 1323473 |
|---|
| End bp | 1325396 |
|---|
| Gene Length | 1924 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | 638252820 |
|---|
| Product | C-5 sterol desaturase, putative |
|---|
| Protein accession | XP_566786 |
|---|
| Protein GI | 58258747 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3000] Sterol desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.549969 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATCCCAGCAA GCATCCACAG AAAAAAATTA ACAAGCAACT TTGTTGACGG CCCGAGAAAT
CCCCTCGTAC GACGGACATT AGCCCCTGCT TCATTGTTTG GCGCTCCTTT CGGCCTGCTT
CTTCCGAACG CGAATTCTTC CATGATAACT GTTTAACACG GCTTTCGCTA TTCGCTTTTC
CTCCTGCACT TTCATCCACC CGTCTGTCTC ACAAGTGTCG AACCGACACT GTCCGACTAT
TTATCTTCTC ACATCTCTAA CGTCCAGGCG TTTTACTCGG CCGATACCGC GTAGACTTGG
TGGTACGATC CTCTCGATTC ACAACGTCCG AGTGCTGGTT GACAATCGAC TTTCATACCA
CTTTTTGACT CGTAGTGGAT AAGATCACCT CTTGATCTTT TCATATCCGT TTTCGACCTT
TCTTATTTGC GAAAACTTTC TACCTGCGTT TACACCTTCG TTCCCCACGT ACACCATGGA
CATCATCCTC GAATACTCTG ATGAATACGT TCTTGACAAA GTCTATAATT TCCTCCTCCC
CCATCCCCCG GTTCCCTCAT CTCTCACATC GATAAACGCC ACTGCTCTTT CGGAATCCTA
TTCTGGCTCA ACGACCTACC ACCCTTCTAT CGAACCTGCC TCCCTTCTCC CTCGCGACTC
TATCATTCGC CAGTCGATAT CCCTTTTCAC CGTCGCTCTT CTCGGCGCCT ATGCCCTCTA
CTTCATCTTC TGCTCACTAT CATACTACTA TGTGTACGAT AGAAGGCTAG AACATCACCC
GAAATTCCTT AAAGACCAGA AGAGGAAAGA AATCATATCG TCCGTTGTTT CGGCACCGTG
GATAGCGTTG ATGACCGTGC CGTGGTTCGT CGCTGAGGTG AGAGGGCATA GCATGCTGTA
TGAGAGCGTG GCAGACTATG GGTGGGGCTA CACGGCGTTG AGCGTGTTTA TGTTCTTGTT
GTTTACGGAC TTTGGGATTT ACTGGGTGCA CCGAATTGAA CACCATCCGG CGATCTACAA
GCACATCCAC AAGCCACATC ACAAGTGGAT CGGTCAGTTG CCCTTGTCTT TCCGCGAAAA
TGAAGGTCCT GTACTGATTC TTTGGCTTTT TAGTACCCAC CCCGTACGCT GCGCTCGCCT
TTCACCCCCT AGACGGCTAC GCCCAGTCCC TTCCTTACCA GTACGTCTCC TTTAGCAATC
AAGAAGCAGT ATGAGCTGAC CCGCTTATCT TAGTATCTTC CCATTCTGCT TCCCTCTCCA
CAAATATGTC TACCTGGGCC TCTTCGTCTT TGTCCAGTTC TGGACTATCC TCATCCACGA
TGGCGATATG ATCACCGGCC ACATATTGGA GAGGTACATC AACGGTCCCG CCCACCATAC
CTTGCATCAC TTATATTTCA CTTGCAATTA TGGACAGGTG CGTCTTCTAT TCTCATTGAT
ATCTCACAAA ATGTATTAGT GCTGATGTAA AGATGTTCCC TCTTGTAGTA CTTTACTTGG
GCAGACCAGT ATTTTGACTC ATATCGTGAC CCCGCTCCTC ATCTGGACCC TATCCATGAC
AGTTTGAAAA TGATGAGAAA GAAGGGACTG ATAGATGAAG CTGGGAACGC TATCCCCCAG
GCTAGAGAAG GGAAGAAGGA ACAATGAGTT TCATCTACAT TCAGGACATT TTTCTCGTTC
TTTTATTATA AGAGGACTGG GAAAAGGAGG AGAGGGCGTT CATAATTAAT GTGGATTATG
TGGAGTATAA TGACTTTTTT TGTAACTTTA GAGTTAAAAA CATGTGATGG GAAGGGCTGG
CCAAATTGGC TTGAGTAGTG AAAAGTTCGA GAGAGACGGG AGAAAGGAGT GGAGGAGATA
AGATCAGCAA AAACGTCTAG ATCTACGTAG AGATATAGAT GAACTTTAGA GCTTTTTTGT
TTGA
|
|---|
| Protein sequence | MDIILEYSDE YVLDKVYNFL LPHPPVPSSL TSINATALSE SYSGSTTYHP SIEPASLLPR
DSIIRQSISL FTVALLGAYA LYFIFCSLSY YYVYDRRLEH HPKFLKDQKR KEIISSVVSA
PWIALMTVPW FVAEVRGHSM LYESVADYGW GYTALSVFMF LLFTDFGIYW VHRIEHHPAI
YKHIHKPHHK WIVPTPYAAL AFHPLDGYAQ SLPYHIFPFC FPLHKYVYLG LFVFVQFWTI
LIHDGDMITG HILERYINGP AHHTLHHLYF TCNYGQYFTW ADQYFDSYRD PAPHLDPIHD
SLKMMRKKGL IDEAGNAIPQ AREGKKEQ
|
|---|
| |