Gene CNA03880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNA03880 
Symbol 
ID3253412 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006670 
Strand
Start bp1041990 
End bp1043345 
Gene Length1356 bp 
Protein Length140 aa 
Translation table 
GC content45% 
IMG OID638252707 
Productconserved hypothetical protein 
Protein accessionXP_566729 
Protein GI58258633 
COG category[S] Function unknown 
COG ID[COG0432] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00149] secondary thiamine-phosphate synthase enzyme 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCCAA CCTCTCAGGC GCTCAATATG CTAATCTTTG TTGAAATTCA CAAGTTCGTT 
GCCCCCTAAT AGGAAGGGGA TGCATCTGGT TTGCTCGTTT TACATTCGAT TTTAGTTACT
TTGCTGATGT TTCTGATGAC CAGGTAACTA ATGAAGTTAT TCAACAGTGT CGGGAAGGCT
TGAAAAACGT AGACATCGGC ATATTCACTC TTCATTGCTT GCATACCTCT GCTGGCTTGA
CTGTAAGCTT GTTTTCTGGG TGCTTTGTGG CTGCTATTCC TGCGGGATCA CTTGCTTATG
TGTGTCTACA TGCAGCTGAA CGAGAATTGT GACCGGTGAG TTGAGACTTC CTGATCGGAT
GATATGATGG AACTTGTTCA TTTACAATTA TTACAATGAC CCACAGAACG GTTCGGACAG
GTGAGTTTGC GTGTATCCAA ACTCAACTGT AGCAGGACTC CTTTCAATCT GACAATAATT
AACAGACATG GATATGGCTC TTGACACTAT CGTGCCCGAA TCTTTACCGT GGGAACATAC
AGATGAGGGA CCAGAGTACG TCTTGACTCT TAACTTTCTT ACTGGAGTGA GCGAAGCTTA
CCTACGTCAT TCTACTCAGT GATTCTGTAT CCCATTTGAA GACATCATTG ATTGGAAATT
CTATCACTGT CCCCATCTCG AAAGGAAAGC TGGTTTTGGG TACGTGGCAA GGTATTTACC
TTGCGGAATT CAGGCATAAT GGCGCAGGAT GGGGTGGGCA AGGACAGGGG CGCAAAGTTG
TTGCTACAAT TCTGTAGGTC GGCCCGCATT AGAAGATGAC CCCATTGACC CGTGCGAAGT
CCATAACACA ATACTTGCCA GCGAATGAAC GATGCAACTG AGACTGAGGG CTGAGTTGAA
TATTTCATTT CGTGAACTGC ACTACGTGCC ATTTCCTAGC CTCCCAATTC TCACAGACGT
CGTCCGTACA TTCTTTCTTA TCTTGCGTTC CCGATTGGTC ATCGGCTCCT TCCAGAGCAA
CTCGTTTTTT GACTTCGACC CTCATACTAG CACCTAACAT GTCGACGATG ATCAAACTCG
CGTTCAGACC ATACACCATG GTGGCAGCGT AGAAGAAATT CGCATTGCCT GTGCCGGTGA
GTAGCCAAAG AGAATGTAAC AAAGGAAGAA GAATAGACGT GTATAGATGG ACGGTGAGGG
AGAACAGAGG ATGGCGTAAA TCTACACAAT CAGATGAGTT GCGATACTTG GTTTCAGCAC
TTTATTTGAC TTACTGGCAA GTATATCAGG GAAGCATCCA ATTAGTCCAG CACAAAGACC
CATATCTCCC AGAGCAGGAA AGCTCTTCCA TGTGAC
 
Protein sequence
MSPTSQALNM LIFVTNEVIQ QCREGLKNVD IGIFTLHCLH TSAGLTLNEN CDRTVRTDMD 
MALDTIVPES LPWEHTDEGP DDSVSHLKTS LIGNSITVPI SKGKLVLGTW QGIYLAEFRH
NGAGWGGQGQ GRKVVATILP