Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNA03880 |
Symbol | |
ID | 3253412 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006670 |
Strand | + |
Start bp | 1041990 |
End bp | 1043345 |
Gene Length | 1356 bp |
Protein Length | 140 aa |
Translation table | |
GC content | 45% |
IMG OID | 638252707 |
Product | conserved hypothetical protein |
Protein accession | XP_566729 |
Protein GI | 58258633 |
COG category | [S] Function unknown |
COG ID | [COG0432] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00149] secondary thiamine-phosphate synthase enzyme |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTCCAA CCTCTCAGGC GCTCAATATG CTAATCTTTG TTGAAATTCA CAAGTTCGTT GCCCCCTAAT AGGAAGGGGA TGCATCTGGT TTGCTCGTTT TACATTCGAT TTTAGTTACT TTGCTGATGT TTCTGATGAC CAGGTAACTA ATGAAGTTAT TCAACAGTGT CGGGAAGGCT TGAAAAACGT AGACATCGGC ATATTCACTC TTCATTGCTT GCATACCTCT GCTGGCTTGA CTGTAAGCTT GTTTTCTGGG TGCTTTGTGG CTGCTATTCC TGCGGGATCA CTTGCTTATG TGTGTCTACA TGCAGCTGAA CGAGAATTGT GACCGGTGAG TTGAGACTTC CTGATCGGAT GATATGATGG AACTTGTTCA TTTACAATTA TTACAATGAC CCACAGAACG GTTCGGACAG GTGAGTTTGC GTGTATCCAA ACTCAACTGT AGCAGGACTC CTTTCAATCT GACAATAATT AACAGACATG GATATGGCTC TTGACACTAT CGTGCCCGAA TCTTTACCGT GGGAACATAC AGATGAGGGA CCAGAGTACG TCTTGACTCT TAACTTTCTT ACTGGAGTGA GCGAAGCTTA CCTACGTCAT TCTACTCAGT GATTCTGTAT CCCATTTGAA GACATCATTG ATTGGAAATT CTATCACTGT CCCCATCTCG AAAGGAAAGC TGGTTTTGGG TACGTGGCAA GGTATTTACC TTGCGGAATT CAGGCATAAT GGCGCAGGAT GGGGTGGGCA AGGACAGGGG CGCAAAGTTG TTGCTACAAT TCTGTAGGTC GGCCCGCATT AGAAGATGAC CCCATTGACC CGTGCGAAGT CCATAACACA ATACTTGCCA GCGAATGAAC GATGCAACTG AGACTGAGGG CTGAGTTGAA TATTTCATTT CGTGAACTGC ACTACGTGCC ATTTCCTAGC CTCCCAATTC TCACAGACGT CGTCCGTACA TTCTTTCTTA TCTTGCGTTC CCGATTGGTC ATCGGCTCCT TCCAGAGCAA CTCGTTTTTT GACTTCGACC CTCATACTAG CACCTAACAT GTCGACGATG ATCAAACTCG CGTTCAGACC ATACACCATG GTGGCAGCGT AGAAGAAATT CGCATTGCCT GTGCCGGTGA GTAGCCAAAG AGAATGTAAC AAAGGAAGAA GAATAGACGT GTATAGATGG ACGGTGAGGG AGAACAGAGG ATGGCGTAAA TCTACACAAT CAGATGAGTT GCGATACTTG GTTTCAGCAC TTTATTTGAC TTACTGGCAA GTATATCAGG GAAGCATCCA ATTAGTCCAG CACAAAGACC CATATCTCCC AGAGCAGGAA AGCTCTTCCA TGTGAC
|
Protein sequence | MSPTSQALNM LIFVTNEVIQ QCREGLKNVD IGIFTLHCLH TSAGLTLNEN CDRTVRTDMD MALDTIVPES LPWEHTDEGP DDSVSHLKTS LIGNSITVPI SKGKLVLGTW QGIYLAEFRH NGAGWGGQGQ GRKVVATILP
|
| |