| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA00780 |
|---|
| Symbol | |
|---|
| ID | 3253464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006670 |
|---|
| Strand | - |
|---|
| Start bp | 225482 |
|---|
| End bp | 227010 |
|---|
| Gene Length | 1529 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | |
|---|
| GC content | 46% |
|---|
| IMG OID | 638252411 |
|---|
| Product | prohibitin PHB1, putative |
|---|
| Protein accession | XP_566503 |
|---|
| Protein GI | 58258181 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTCATTTCTA CCTTAAACAC GTGTAAACAC TATCAACAAT GGCAGCTGCT CAGAGAATTT
CCAGGCTGAT AGGTATGTCC AACTTTTGAA TTATTGGGGC TCGCAAGGCC GTGGGAGAAT
GGAAGGTTGC CGCCCGATCT CTGCCGACTT CCCGTGTGGT CTCATCTTCT GACGCAGGCC
TGTGCTAACA ACATGTCTTC CTATGAATCT AGTCCCTCTT GCTATTGGTG CTACCGTCGT
CCAATCTGCA CTTTACGATG TTCCCGGTGG ATACCGTGCT GTGTTGTTCG ACCGGTTTTC
AGGTGTCAGG CCGGATGTGA GTGGTGCCCA GCCCTACAAA TTCCTCTGTG GAATGCATGG
GTGCAAGCGC TAGAATAAAA AAGATACTAG ATTAATTAAT CCGTGTGTAG GCTACCGGAG
AAGGTACACA CTTTTTGATC CCTTGGTTGC AGCGAGCGAT TTTGTACGAT GTGAGGATTA
AGCCTCGAAA CATCTCTACC ACAACTGGGT CCAAGGGTAA ATTTCTTCTA TTATCTCATG
ATTTTATTTC TGATAAACTG ATATATTTAA TGTAGACATG CAGATGGTTT CTCTCACTTT
ACGTGTTATG TCTCGACCGG ACATCGAGCA TCTTTCGAAG ATCTATCAGT CTTTGGGTCT
TGAGTAAGCC TTTCGTTTCC TTGAAGCACT GTAGCAGAAG CTAATACTTT AGTATAGCTA
CGATGAGCGA GTTCTTCCCT CCATTGGTAA CGAAGTGTTG AAGGCTACCG TCGCTCAGTT
TGATGGTGCG GGGATTTTCG TATTTTCAGA CGAGTGATCC TTGACTAACG AGCGGTCCCT
TTTATAGCCT CTGAATTGAT CACAAATCGA GAGATTGTTT CCGCTAGGAT CCGTGATGAC
CTTCTGAACC GAGCAAAGGA GTTCAACATC CTTCTTGAAG ATGTTTCTAT CGTGAGTACG
GTTTTTTTCC ACGTCCGCTC GCCACTGACT TTTACACTTT TAGACCCACA TGACGTGCGT
CCCTCTGTAC CTTTTCTCGC ACAACGTGAA TCGTGACTGA CATGCTGTTT GATTAGCTTT
GGCAAGGAAT TCACCTCTGC TGTCGAACAG AAGCAGATTG CCCAGCAAGA CGCCGAACGT
GCCAAGTTCG TTGTTGAAAA GGCCGAACAA GAGCGTCAAG CTTCCGTCAT CCGAGCCGAG
GGTCAAGCTG AGGCTGCTAA CACCATATCT AAGGCCTTGA GCAAGGCTGG TGATGCGTTT
ATCCAGTTTA AGAAGATTGA GACTAGTAGG GAAATTGGTA TGTCTATTCT CTTCACGACT
TTTCTGGCAG ACCAACTTAT GATTGGTCTC GAACAGCCAA CACTCTTTCC CAGAACAAGA
ACGTCAGTTA CGTCCCCGCA GCCAATGGCA ACATGCTTTT GCAAGTCCCT TCTCAACAAC
AATAAGCTAC AAAATGAACA TAGTGAAGAT GGAGACTTAG GGCACATTCA GATCTATAGT
CCCGTTATGT ATGATGCAAA TTTGCCTCT
|
|---|
| Protein sequence | MAAAQRISRL IVPLAIGATV VQSALYDVPG GYRAVLFDRF SGVRPDATGE GTHFLIPWLQ
RAILYDVRIK PRNISTTTGS KDMQMVSLTL RVMSRPDIEH LSKIYQSLGL DYDERVLPSI
GNEVLKATVA QFDASELITN REIVSARIRD DLLNRAKEFN ILLEDVSITH MTFGKEFTSA
VEQKQIAQQD AERAKFVVEK AEQERQASVI RAEGQAEAAN TISKALSKAG DAFIQFKKIE
TSREIANTLS QNKNVSYVPA ANGNMLLQVP SQQQ
|
|---|
| |