Gene CNA00620 details

Gene Information

• Locus tag: CNA00620
• ID: 3253483
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006670
• Strand: +
• Start bp: 177801
• End bp: 179730
• Gene Length: 1930 bp
• Protein Length: 411 aa
• GC content: 50%
• IMG OID: 638252395
• Product: disulfide-isomerase precursor, putative
• Protein accession: XP_566486
• Protein GI: 58258147
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG3118] Thioredoxin domain-containing protein
• TIGRFAM ID: [TIGR01068] thioredoxin; [TIGR01126] protein disulfide-isomerase domain; [TIGR01130] protein disulfide isomerases, eukaryotic

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTCCCATTTC CCACTTTCTA CACAAAAATG CGGCTCAGTA TCTCAATCTC AGCGGCTCTT 
CTCGCTTTTA CATCTCTGGT GTCTGCCAGT AACGTCGTGG ACCTCGACAG TACCAACTTT 
GACCAGGTAC GTCGATCTGC CAGACAAAAG CAGTGATAAG GATGCGAGAG CTGACATTTG 
AGGATAGATT GTTGGACAGG ACAAGGGTGC CCTTGTTGAA TTGTGAGTTT AGATGGCTGT 
TGTGTAACAG TAAAGTGGTT TGCTAATTAT CGACTCAGCT TCGCACCGTG AGTTTAACGA 
GAGCGTCTTG TGTAGATGCG TACGAAGGAA GATTATGCTG ATCAATGTCG CGAAGATGGT 
GTGGTCATTG CAAGAACCGT ACGCTGCACA AGTTCAATAT CATCTGTATC TTTGCTGACT 
TTTGCTTTAG TCGCCCCTAC GTATGAGCGT CTTGCCGATG CTTTCCCGAC CGTTCGTTAC 
TTACCTATAT ACCATCAAAG GAGCTTACAG CTGACAAATA TCTTGCAGGA CAAAGTTGTC 
ATCGCCAAGA CTGATGCTGA TGGTGTCGGA CGGGAGCTCG GTTCTCGATT CGGTGTCTCT 
GGTTTCCCCA GTATGTCCTT GAAATCCGAG CCCCTCGGTT CCGTAATGCT AACCAATTTT 
CAGCTCTCAA ATGGTTCCCT GCTGGCTCCC TTGAACCCAT TCCTTACAGC GGTGCTCGAG 
ACCTCGAAAC CCTTGCTGCA TTGTCAGTAA TATTCCTCTG CTCACGCTAA GCACGTCACG 
TTAATAATTG CTCTGTACGG TAGCGTCACC AAGCAATCTG GCGTCAAGTC CAACATCAAG 
CCTCCTCCTC CTCCCGCTTA CACTGAACTC GATGCTTCCA ACTTTGACGA AATCGCCCTT 
AACGAGAGCA AAAATGTCCT TGTCGCGTTC ACTGCTCCTT GGGTGAGTTA TCATCATCAC 
ATGGCCACTT GGAGAGATAT TCATCGCGCA TGCTTTATAG TGCGGTCACT GCAAGAACAT 
GAAACCTGCC TATGAAAAGG TCGCTAAAGT CTTTTCCTCT GAGCCCGACG TTGTCATCGC 
TTTGATGGAT GCCGACGAGG CTGAGAACAA GCCCGTCGCT CAGCGTTACG GTGTCTCCAG 
CTTCCCCACT ATCAAGTTCT TCCCCAAGGG TTCCAAGGAA CCTGTCGCTT ATGACTCTGG 
TAGGACTGCC GAACAGTTTG TCAACGTACG TATGCCCAAG CTCTAAATGT TCGCTGCCAT 
GGTGGGGTAT CGGTTGCTGA CAGTCATAAC TGTCAATTAC AGTGGATCAA CGAAAAGTCT 
GGCACTCACC GATCTGTTTC CGGTCTCCTT TCCGAGACTG CCGGCCGTGT CCTCACCCTT 
GACACACTCG CTTCCGAGTT CTTCTCCGCC AACGTCCCTG AGCGCTCCGA GATTGTTAAG 
AAGGCCCAGG AGGCTGTCAC TACCGTCGAC GAAAAGAGCA AGGCTACTGC CAATTACTAT 
ATCAAGGCTA TGGAGCGGAT TACTGCCAAG GGCGAAGAGT GGTTGACCAA GGAACAGGCT 
CGGTATGTCT CCTCTCTTTA GACAAAGTGG AGAGGATCAA CTTTTTGCTG ACCGATATTC 
GTGTCAATAA ACAGACTTGC CAACCTCCTC GCTTCCCCTT CTCTCGCTCC TACCAAGCTC 
GACGAGCTCA AGGTCAAGAT CAACATCCTT TCCGCTTTCG CGGCCCAAAA GGCTGGTGAG 
GCTTACGACT CTGCCGAGGA GGTTCTTGAG GACGCTTGGG ACTCTGCCAA GCAAATCCCT 
ATCCAGGCGA AGGATGGTCT CGACCAGTTT GCTGATGCTG TTGAGGAGAA AGCGAAGAGG 
GTTAGGTCTG ATCTCTAATC TGATCTGTAC AAATACATAC CCCTTGATAA ATGCATAAGA 
GCCATGAAAA 

 

Protein sequence

MRLSISISAA LLAFTSLVSA SNVVDLDSTN FDQIVGQDKG ALVEFFAPWC GHCKNLAPTY 
ERLADAFPTD KVVIAKTDAD GVGRELGSRF GVSGFPTLKW FPAGSLEPIP YSGARDLETL 
AAFVTKQSGV KSNIKPPPPP AYTELDASNF DEIALNESKN VLVAFTAPWC GHCKNMKPAY 
EKVAKVFSSE PDVVIALMDA DEAENKPVAQ RYGVSSFPTI KFFPKGSKEP VAYDSGRTAE 
QFVNWINEKS GTHRSVSGLL SETAGRVLTL DTLASEFFSA NVPERSEIVK KAQEAVTTVD 
EKSKATANYY IKAMERITAK GEEWLTKEQA RLANLLASPS LAPTKLDELK VKINILSAFA 
AQKAGEAYDS AEEVLEDAWD SAKQIPIQAK DGLDQFADAV EEKAKRVRSD L