Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNA00590 |
Symbol | |
ID | 3253743 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006670 |
Strand | + |
Start bp | 167224 |
End bp | 169791 |
Gene Length | 2568 bp |
Protein Length | 333 aa |
Translation table | |
GC content | 48% |
IMG OID | 638252392 |
Product | specific RNA polymerase II transcription factor, putative |
Protein accession | XP_567081 |
Protein GI | 58259337 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTCCTCTTTG TTGTTTTCAC TCCATCCACT CATCTCACCA CTCAAACCGA TCCAGCAAGG AAAGACCTCT ACAGCGGTAA GGGGAAATCT AGGTCGGCCA TCTCGTCATT CCGAATCCCT CAGTTGTCAC CGATTTTCTC TCTATCTCGC CTTCCTTCCG ATAAACCTTT TATCTTTCTC CTTCATTACA ACTTCAAAAT TCTTTCCTTC ATCCATCAAC TTTCCAGCTC AGTCGCTGCC AAAGACAGCT AACGTTTTGT GCCGCAACAG CGCAAATTTC GACGACGCCG GTATTGCCGA CCACGAACAG TATTGTGGAA CGACCTGTGG GTGTCGCCGA GAAGTATCGC GCTTCGAAGA GTGTCTTGCA ACGACGTTTA GAGGGGCAGC CTACTTTCCA TATTTGGAGG TTGTAGGATT TTGACCCCTG GAGTAACTTT CCCTGGCAGC GCATAGGTGG ACAAATTCTT GGGTTCAACA CTTATCGTGA GTACCATCGA CATTCCAGAA GTCCAAGGAA GCATCCAGTT ACTGACACAG GTACAAAATT CATTTCTGAT TATCAGGTTA TAGACGTAGA CAAACACTCG CACCCTTTAC TCCTTATCCT CCATTCTTAC TCTCCCAACT CTGTCTCAAA ATGAGCAGCA TACATCACCA GGTATCAGCA ACGTACGAGG GACGAACAGG GGAAGGAAGG ACTGATGTGA GTGTGAGTCT TTCCCTCTTT GGAACTTTGG GCGTGTTTCT TCGTCTATCA CCTCCGCGTT GCCTTCGTGG AATCTCGATG ACTCGAGCAC GGTTTTGCAT TAAGCGTCCT TTTTACTCTT TCTCTGATCT GACACGCCAA CGAGAGTACC TCAATGAGGA TTCTCAGCGC CATGTTGGAT CAATGAAGAG AAACAAGACG GAGGCAGATC GGAGATACTG GAAGATTGGC CATCAAAAAG CACTGAAAAA ATGGAAAATG GAAGATGCCC CGATTTGATC GGACGAAGCG CGTTGGGCCC CTCGTGGGAT CTGTACAAAG GAAGGGAAGA GTTCTTTGTG GAAGATGTTC AAGGCACGGA ATCCAACGCC TTGAGACCTA GGAACCATTG CTGTTCTGGT TATTGACGGC GAATGATTGA CATGTGAGCT GCGGTACTGG GCGTACTGTC GGTCTTCTTC TATTATCACG CCAATTAAGC ACCGAGCAGC TGTCATGATC CGTGGCATAC GCTTTGTGCA TTATAGCTCG CCGGCCTCAC CTACGTCTCT GCCATCGTAC TTATGCCGTA CGATACGAGA TGTGCAGTTG CTTTGTGGGC ACTCTTTGTG GGCACTCTTT CCCTCGAATG TTTCGACACT AGGGGGTCAC TCTGCTTAAC ATTCAGTGCT GAAATACAAA AGTGTCTGAT GGGGAGAAGT AAAGCACATG ATTAATCCAC TATTACTCCT TCCCTTCCCT TTGCTATTCT TTTTTTTTCT CGCTTGGTTC CATCCATGGC ATCAATTAAT TATGCCTTGC ACCTCGGCTC CAATTATTTT GACCATTAAT TCAAATCAGT TGCTAACAAT TGTGCTGTTT GTTTATCAGC CGTATCCCCA GCAACAGCAT TATCCTACAT CGGCGCAACC GTCTTTCCAG CCTCCTCCGC CTATATCACC TCCATCGTCT TCTCCTTTCG CCTTTGCACC ACCTCCCCTT GGAACTACGC TGCCTCCAGG AGGGACATCT CGTCCTCCAT TGGTGTCACA TCACTCTGAT CCACCACCTG TCGCTCAACC TATATCCTAT TCGTTCATGA AGCAGCAACA GCAACTACCA CCTCCGGCTC CTCACCATGG AAGTTATCCC TATGTCACCA GTATTCCCAT GAGCTACCGT TCATATTCAG GGGATAGTGA TAGGAACTCC CCTCAATCAC TGAACGGTAG GGCGCCCGCC CCAAGTAATC CTTCTACTCA TTCTGCTTCA ATATCTGCTC AGTCAAGCCC GTTACCATCG AATTTTCAGT ATCAGCGTCA AATGCTGCCC GGACCGTATG AAGCGCCTGT GGGACAAACA TTACCAGATC TAAATCGTTC AGCGACGTAT CCTCAAGGTT ATTACAATCC TGGGTACGCA TCGGCCTTAT CTACGGAGAT GCCCCGTTCG CTTTCGTACC CCTCTGGATA CTCTCAGCCG TACTCTTATA TCCCCCCATT ACCATCACCC ACGTCTTTTC ACCCGGCCAT TCCTGGCTAT TCATCGCTTA CGAGACATCA TACTCTTGGT ACGGGGCCTT CGTACGCGTT TAGCAGCAGG CAACCTGTTC AAGATCGACC GTTCAAATGC GATGAATGTT TGCAGAGCTT TGTAAGCATC TTTTGACAGC ACATGTATTG AGAGGGTAAA GTTGGCTTAC GATAGCTTAG AACCGTAATC ACGACCTGAA ACGTCATAAG AGAATCCATC TCAGTGTCAA ACCCTTTGGC TGTGAGAAAT GTGGTAAAAC ATTCTCCCGT AAAGACGCAT TGAGAAGACA TTGGCTAGTC AAAGGATGTC GAGGTTCTGA GGGCGCTACC GCACCTATAG GTGAGTGA
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Protein sequence | MSSIHHQVSA TYEGRTGEGR TDVSPYPQQQ HYPTSAQPSF QPPPPISPPS SSPFAFAPPP LGTTLPPGGT SRPPLVSHHS DPPPVAQPIS YSFMKQQQQL PPPAPHHGSY PYVTSIPMSY RSYSGDSDRN SPQSLNGRAP APSNPSTHSA SISAQSSPLP SNFQYQRQML PGPYEAPVGQ TLPDLNRSAT YPQGYYNPGY ASALSTEMPR SLSYPSGYSQ PYSYIPPLPS PTSFHPAIPG YSSLTRHHTL GTGPSYAFSS RQPVQDRPFK CDECLQSFNR NHDLKRHKRI HLSVKPFGCE KCGKTFSRKD ALRRHWLVKG CRGSEGATAP IGE
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