Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNA00310 |
Symbol | |
ID | 3253823 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006670 |
Strand | - |
Start bp | 101924 |
End bp | 104181 |
Gene Length | 2258 bp |
Protein Length | 490 aa |
Translation table | |
GC content | 50% |
IMG OID | 638252365 |
Product | expressed protein |
Protein accession | XP_567078 |
Protein GI | 58259331 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGCCCCT TCCCACCTAA GGTAAGAAAT ATCTGCATAT CTCAAACTAT CCACCAATCC TTCCAAAGAA GAACAGTGAC CGCCATGTCC GCCCGACCTC CTTCGTTTGC CAGCAACTTT CCGACCTCAA CTGCTGAACC TTCGGCATAC TTCAAGTGGC CAGGGATTAC CTGGGACAGC ACCAAGGCGG TGAGAGAAGT TCTGGAAGAG AATAACAGGG GGTATGACAT CTATGAATCG AGGCGTTGTA AGCATTTCCG CTAATGATTT GTCTCCAAAA TCTCTCGAGA ACAGAACTAA CGGGATGCAT CGCCGCCCTA GTCGCTCACA ATCACTTCCC TCACTCTGTC TTCTCTCGTT ATGCTTTTGG AGCGCCACCC AAATTGATCC ACGACTGTTG GAATCATGAC AAGACACATC TCGTTTCGCT AGATCCCGCA GGTCCTGATA GGAAGGATGT CGATGAAACC AAGGTGCCCA AGAGAATAAC CAGGGAAGAT TGGGGCAATC ATCTCGGGAA TAAAGGGTGA GCAAAATATA TGATATCGGC TCTTGTTTTC TCTGGTAAGC AACTGACGGT ACGGACACAG ATGCTATGCC CCTTATCTGG TGTTCTTCCA CGATGAAATC GCACGTCTCG GTCCTCAAGG TGTTCTCGAA GAATACATCT TTTCCCCTCA AGCTAATTGG GAGATCTTTA CCGACCCCTC TAGTAAAGAT CAAGGTCCTC CCAACATGTT CAACCGGCTT TTGGCAGGGG CAATACATCC TTTTATCCAT ATTGGGTTTG GATTAGAGTT CAACGATCGA GTAGTTTTGG CCGAAGGGTG AGTTTCCGAT ACCCCTAGCC TTTTAGGCTC CATCTACCAT GAGAAGAGCT GCTGAGATCT TTCGGCTGCT AGACTGGCAG AGGCCGCCGT CCACCCAGAT GTGATCGTCA ACCTCGTCAT CCCCCCTTCC CATATCCAAC CTCTATTCAC CACCTCCTCT CCTCGTCCCT CTTCCTCCCC TTCCCTCCTC TCGATCTACA CCTCCCTCAT ATCCTCTCCC ATTCTCACAC CCCAGCCTTA CGACCCCAAA TCCATGGTCA ACGACCAACT GAAATCATCT GTCAACGGTC CCAAAGCCCA AGAGCTGCGA GCGATCGTAG ACCGATGGAG TTTGTCTGAC GAAGAGGTCG CAGATGGACC AAACGGATGG CAAAAGAAGT TTGAAGAGAT TGCAGTTTTC GCTACCCTTT TGGCGTGTGC GACTGGGAGG AAAGGCAAGG AGATCCGAGT TGATTTCTTC CTTGTAAGTC ACTCCTTACC CCTTTACATC AACGTCCTAT ACTCTGCCCT GGGTACCGTT ACTAATTCCG CAATTTCTTT TCATTTTAAT TTTTCGGAAC GTCAAATTCG TCTGTTTTAG ATGCACGCTC TAACTTCTTC CATCTTCCTC CCCGCCTATC TCTCCCGCCT ACCTCCGTCC TTCCGTCGAG CTCTTTTAAG GCGGTACATC CTCGAAGCCT TCCACACCGC TCTTGCCCGT GGACGACCCT CAATTGATCC GGAGCTAATC ATGTCGTATG ACCTTTACCC TACCATCAAT ACCGAAGGAA GTGAAGATGC CCTAAAGAAA TTGGTAAAAG AGGATAAGGC GTTGGGGAAG GGGGAGAAGG AAGAGAGGAA TGCGTGGTTG AGTTTGGTGG AGAGTGCGAT GGTTTACCCT GGTATGTCCC TTCTGTTTGC CTTTATCACT TTTTTTCTTC CCTCTCTTCC TCCCTCTCGA ATGATTCATA TTTGCCACCC ATCCGTCCGA TAGGGCAAGA TCAATCCCAA CCCCTCGAGA CCACCTTATC ATTGTCTGAT TCGCAACTTT TTGACACTAA CATTACAATC CGCCAGATTC TCACGTGATA AAGTCGATCC GCTCACTCGC ACATTACGCC TCCCTCCTCG GTAACTCTCC TCCAGGTGGC TTGCCGGGTA CCTACAAAGA AGAAGGAAGG GGGGTTGATA AAGAGGAGGC GGTTAAGGGT ATGAGTAAGC TTGATGGCAG TGTGTTCTTG AGAGCTGCGG GTGCCATAAT GACGACGATG GCGCCTGGCG GGGAGGGCGC ATGGGATAGA AGTCAGTTGG GGTATGATGA GGCGTGGGAA TGAGAGGACG CGGTAGCAAC GAAGAACAAA AAGGAAAGGG TCAAGGGATC TAACCAGTGT AGCACTTCAA TTTTGTAGCC ATATCATCTG CTAAGAAAGA CACATATGAA GTGGTGGT
|
Protein sequence | MGPFPPKVRN ICISQTIHQS FQRRTVTAMS ARPPSFASNF PTSTAEPSAY FKWPGITWDS TKAVREVLEE NNRGYDIYES RRFAHNHFPH SVFSRYAFGA PPKLIHDCWN HDKTHLVSLD PAGPDRKDVD ETKVPKRITR EDWGNHLGNK GCYAPYLVFF HDEIARLGPQ GVLEEYIFSP QANWEIFTDP SSKDQGPPNM FNRLLAGAIH PFIHIGFGLE FNDRVVLAEG LAEAAVHPDV IVNLVIPPSH IQPLFTTSSP RPSSSPSLLS IYTSLISSPI LTPQPYDPKS MVNDQLKSSV NGPKAQELRA IVDRWSLSDE EVADGPNGWQ KKFEEIAVFA TLLACATGRK GKEIRVDFFL MHALTSSIFL PAYLSRLPPS FRRALLRRYI LEAFHTALAR GRPSIDPELI MSYDLYPTIN TEGSEDALKK LVKEDKALGK GEKEERNAWL SLVESAMVYP GMSLLFAFIT FFLPSLPPSR MIHICHPSVR
|
| |