Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNA00180 |
Symbol | |
ID | 3253522 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006670 |
Strand | - |
Start bp | 54488 |
End bp | 57199 |
Gene Length | 2712 bp |
Protein Length | 599 aa |
Translation table | |
GC content | 48% |
IMG OID | 638252349 |
Product | calcium ion transporter, putative |
Protein accession | XP_566450 |
Protein GI | 58258075 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0387] Ca2+/H+ antiporter |
TIGRFAM ID | [TIGR00378] calcium/proton exchanger (cax) [TIGR00846] calcium/proton exchanger |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0287114 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATCATAACAG AAAAACAAAC CATGTTTCAC CAAAGCAGGT CCTTTCTATT TTCGATCTAT ACAAGCTAAC CAACAATGTC GCTTCCCCGC CGCGTCTCCT TCCCTCCAGA CACCCAAGAG GACCCTCCAG TTAGCGACTC TCCGTTGAGC TCACCGAAAC TCCCAGAATA TGACCCCCAA TCATCCTCCA CCACGCCTAT TGTATCCAGC AACTTGCCTA CAGACACAGC CAATACTGCT TCTGCTGGGC CACGCCGACG CCAACAACCA AGCAGACAAG TCACGCTAGA CGCACGTCCA CCCTCCGCCG CCAGGCGTGG AACTACAGAA AGCGCTCGGA CGCAGCACAG CAGGGCAGGC TCAAGACGGA CGTCGAATAG TTTAGATCCC AACCCAGGTC TGATAAGGCG AGTTACGACG GTGCTGTTTA CGCCACCGAA GAAGATTGGT AAGGCACCGA CGTATTGGGG AAGTATAAAA GCTGCGATAA CAAGCACTTG GTTGTGAGTC TGTTGGAAGC ATGACAAAGG AAGTATGACT GACTGAACGG CGCAGAAATA TTTTGCTTGT GTTCATACCC ATCGGATGGG CGCTCTATCT TGCAAAGCAT AGCGGCGGAA AGGACAGCAT CTCTGACACT GCTGTTTTCT GCTGTACCTT TATCGCCATT ATCCCTTTGG CCGGTTTGCT TGGGTTTGCC ACCGAAGAGG CGGCTTTGCG ACTAGGACAA ACACTTGGTG GTTTACTCAA CGCGACTTTG GGAAATGCCG TCGAGTTGAT TGTTGCCATT CTTGCTCTTA TCAAGGTGAA TTGAGTTGCT AGCAGAAATT AAACAAGCTG AATCCTCTCA GTGCGAACTG CAAGTCGTGC AATCATCACT TGTCGGCTCC ATCCTCAGTA ACATCCTTCT TGTCCTCGGC ATGTGCTTCT TTGCAGGTGG TGTCCGATTC GCTGAGCAAG CTATCAAATC TACCGCCGCC CAGCTCAACG CATCTTTATT GCTCATCGCG GTTATTGCCG TGCTCATCCC ATCTGCTTTC CATTTTTCCA TCAGCTCGAG TACGAGTAAC ACGGATGCTA GCGAGCTGGC CAATGGTGAG GGCGCTGATC TGTTGTCGAT GAGTCATGCT GTATCGATCT TGCTTTTGAT TCTGTACCTC GGTTATTTGC TCTTCCAAAT GTGGACTCAC GCCGTAGGTC GTTCGTTCGC CTCTATGTTA TCGCCAAGTG CTAAATGCCC CTTTCTAGAC TTATTATGTC GATGACGCCG TAACAGGCTC GACTCAATAC CCGGAAGCGA TCACCAACGT CTCTGAGAAA CTCAAGTTCC GCAATTTCCA CCGTAGGAAG CACGATGAAG AGGAAGGCTA CTCAACGGCG ACGACGGTAT CGGAAGCTAC TGTTCCTCCT AGCGCGCGTC CCGGAGGTGG AGAGGTGCCA GCGACTCATG GTCCTGGGAC CGTTGCTTCT GAGACTGGGA ATCGGGTTGA ACATGAAAGC GAGGAAGAGG AAGAGGAGGA AGAGACGCCG CAAATGAATG TCGTCTGCAC TATCGTAAGC ATTTCCCCAT CAAAAGTAGT ATGGAGTCGT ATTAACCGAT GACCGTAGGC TTTGATGGTC ATTGACACCG TTCTTGTCGG TGTGACGGCC GAGTTTTTGG TTGACAGTAT TAATGGTATG GTCGAAAGCA ATCCTAGTCT GTCTGCAGAA TGGGTCGGTT TAATCTTGCT TCCTATCGTG AGTAATTCCT TGCCCACAGC AGTCCTCATT GAGCTTTCCT TCTTACTGAT GTGGAATGGT TTGTAGGTTG GTAATGCAGC AGAGCACTTT ACAGCTGTGT CAGTGTCCGT GAAGGACAAA CTCGACTTGT CAATCTCCGT TGCTGTATGT TCTCATCGAC TTTTTGATCT TCCCCGTTTG CCTCTAACAC CACATATTTT CAGGTGGGAT CGTCGATCCA AATCGCCTTG TTTGTCATTC CCGTCATCGA ACTGCTTGCT TGGACTATTG GCAAGCCCAT GACACTCCTT TTCGACCGTG AGTCTTCATC TTTGAACCAA AAAAAAAAAA AAAAAAAAAA AAAAAACCAA CGCCGCTGTG GAGACTGACT TGATCTTTTG GTTGCATTTC CATAGCTTAC GAGTCTATCG TACTTTTCTT ATCTGTATTG ATCGTCAACC AAACTTTGGC GGACGGACGA TCAAAGTGAG TTCTCTATAG ACACGCTTTA CGTTTTGTTC AGAGACTAGC ACTTGCTAAC CGACCAATTC ATGTAGTTGG ATGGAAGGTA TGGTCTTGAT GATGCTGTAT ATCATCATCG CTGTATCGTT CTGGTACTAT CCCGTACGTC TTGATCTTTT CCCCTCCTTT TTTGACTGTG CTGACAAGCG TGCGGTACGG GCAATAGGGA TCAACCACCG CGACATTATT AGGTTGTCAA GATTCATCCA GCGTCACCGG CTAAAAAAAA GAACTTCATT TTCATTTCGA TATTCAGCAT GTGTAGCATA AAAAGATCCA TCTTACCCAT CATGTTCTTT AATGCCAACT TGTAATGTAC ATAAGACGGA AATGTTTATG GAGATCTTCG GCCCCTTTTT ATCCTACCCT GAGCTTCTTT ATACCACTTT GGCTAAAACC ATATACCGGA TCTCATTTAT GACTATTATT GACATCGCAA GTAGCACACA CGCCGGTGAG ATAAGTAGAT TG
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Protein sequence | MFHQNTQEDP PVSDSPLSSP KLPEYDPQSS STTPIVSSNL PTDTANTASA GPRRRQQPSR QVTLDARPPS AARRGTTESA RTQHSRAGSR RTSNSLDPNP GLIRRVTTVL FTPPKKIGKA PTYWGSIKAA ITSTWLNILL VFIPIGWALY LAKHSGGKDS ISDTAVFCCT FIAIIPLAGL LGFATEEAAL RLGQTLGGLL NATLGNAVEL IVAILALIKC ELQVVQSSLV GSILSNILLV LGMCFFAGGV RFAEQAIKST AAQLNASLLL IAVIAVLIPS AFHFSISSST SNTDASELAN GEGADLLSMS HAVSILLLIL YLGYLLFQMW THATYYVDDA VTGSTQYPEA ITNVSEKLKF RNFHRRKHDE EEGYSTATTV SEATVPPSAR PGGGEVPATH GPGTVASETG NRVEHESEEE EEEEETPQMN VVCTIALMVI DTVLVGVTAE FLVDSINGMV ESNPSLSAEW VGLILLPIVG NAAEHFTAVS VSVKDKLDLS ISVAVGSSIQ IALFVIPVIE LLAWTIGKPM TLLFDPYESI VLFLSVLIVN QTLADGRSNW MEGMVLMMLY IIIAVSFWYY PGSTTATLLG CQDSSSVTG
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