Gene CJJ81176_pVir0032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCJJ81176_pVir0032 
Symbol 
ID4682028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. jejuni 81-176 
KingdomBacteria 
Replicon accessionNC_008770 
Strand
Start bp23562 
End bp24815 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content27% 
IMG OID639832935 
Producthypothetical protein 
Protein accessionYP_980091 
Protein GI121582689 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000480252 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAAGC CTAAAGTCTT TAATGAAGAG ATACTTACTC TCCCTTTTGA TATGATACTT 
ATGCAAAATG GCTATTTTCA CAAAAAGGAT AAGTGCAGTC GTAATTTTAT TACTATGAGT
AATGATAGTG ATTTAATTGT TATTACAAGA CAGACTAACG GACAGTATTT ATATTTTAAT
CCCAATGAAG AAAGCGATAG GGGTAATATT TATTCTTTTT GTAAAAATAG GGGTATTAAA
ATCAATGATT TGCTTAATGA TAAAGTCGAT AAAATAGAGT TAAAGCATAA TATAGAGCCT
TCTAATTCTA TGAATAAGGC TACGGTTGAA GCTCTTAATA ATTATAAATC TTTCACTACC
ATAAAGCAAA AAAATTTTTT TAATGATGAT AGATTAATCT CTCAAGAGAT TTTAGAGACT
TTTAACACTT TAAAACAAGA CAAACATTAT AATGTTTGCG TGCCTACTTA TGTTTTAGAT
AATTTTGAAG GTAAAGAATT TATTAATTCT AGTGGCTATG TAGCTTATTT AAGAAGACCT
ATCACACAAG ATAAACAAGG TAATACTTAT AATAAGCCTA TTAAACAACT TTGTTATGGA
AATAAAGGGC TTGAAATCAT CAGAAATAAA GACAATAAAC AAAAGATTGA AGATATTAAA
ACTATCATCA TTACAGAAAG TATGGTTGAT AGTCTTTCTC TTTTTGAACT TAAAGATTAT
GATCCTAATA GCACTTTACT TTGTGCGACA AACGGACAAA TTACTAAAAG CCACAAAGAA
ATTTTTGCTT ATTTTGAAAA AAATGCAAAA AATGCTAAGA TCGTTTTAGG GTATGATAAT
GATGAAAAAG GACTTGATTT TACTCTAAAA ACTAAACAAT GCTTTAAACA AAGAGAAATT
ATAGAAGAAA ATCCAAAGCT AAAAGATTTT AACGATGATT TGCTTATATC TAAAGTTTTT
GGATTAAAAA AGGATTTTTC TTTAGAAGAT ATACAAAAAG AAATTAATTC TTTGCAGGAA
AAGACAGAAT ATTTACTTGG TAGAAAAAGT GTCTTAATAG AGAGTAAAAA AACAGAACTT
ATCAAAGAAA TATCAAACAA TGATATTCCT TTAGTTTCTT ATTTAAAGCC AAAATTAGAA
AATTTTGTAA ATTTAAAGGC TTTGGGAAAA AGATTTGATG AGTTTAATGC GTATTTAGGT
AGAATAACAG AAAATAAAAA ATTAAGGAGT AGTGAGAATG GAAGAAAGCA TTGA
 
Protein sequence
MPKPKVFNEE ILTLPFDMIL MQNGYFHKKD KCSRNFITMS NDSDLIVITR QTNGQYLYFN 
PNEESDRGNI YSFCKNRGIK INDLLNDKVD KIELKHNIEP SNSMNKATVE ALNNYKSFTT
IKQKNFFNDD RLISQEILET FNTLKQDKHY NVCVPTYVLD NFEGKEFINS SGYVAYLRRP
ITQDKQGNTY NKPIKQLCYG NKGLEIIRNK DNKQKIEDIK TIIITESMVD SLSLFELKDY
DPNSTLLCAT NGQITKSHKE IFAYFEKNAK NAKIVLGYDN DEKGLDFTLK TKQCFKQREI
IEENPKLKDF NDDLLISKVF GLKKDFSLED IQKEINSLQE KTEYLLGRKS VLIESKKTEL
IKEISNNDIP LVSYLKPKLE NFVNLKALGK RFDEFNAYLG RITENKKLRS SENGRKH