Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJJ81176_pVir0005 |
Symbol | trbB |
ID | 4682040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
Kingdom | Bacteria |
Replicon accession | NC_008770 |
Strand | + |
Start bp | 3085 |
End bp | 4038 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 639832908 |
Product | conjugative transfer regulon protein |
Protein accession | YP_980064 |
Protein GI | 121582662 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTAATA ATACTATTGT TTTAAATAAT ATTTTAAATG TTTTAAAACC TTACTTAGAA ATGGAAGCAA ACGAGCTTAT TTTTAATAAA CCTTGTGAAA TCAAGGTAGA TAAAGGCGAT GTTTGGGAAA CTATTTATGA TGATAGGCTC AATTATAATT TTTTAGAAAC CTTTTTAATT GAACTTGCTA TTAAAAGAAA TCAGAGATTT GATGAAAAAC ATTGTCATCT CTCTTGTGAG TTGCCTTACC CCTTTTTAAG ATATAGGGTG CAAGCACAGC ACAAGACAAG TCTTTTTAAT TCTGAAATTT GTATTTGTAT CAGAATACCT TCAAAAAGTC GTTTTGCACT TGAAAATTTT GTTTTAAACG ATAAGTGTTT AGAAAAAGGT TGGACTTATG AAAAAATTAA AGATTTAATT AAAAATAAAA AGAATGTTTT AGTCTCAGGT GGAACAGGAA GTGGAAAAAC TAGCTTTTTA AATTCTTTAA TGGGTGAAAT TGATCCAAAT GAAAGAATTG TAACTATTGA AGACGCTCAA GAATTATATA TCGAAAACGA GAACAAAACC CAATTAGCCG TGCCAAAAGA AGAAAGTGAA ATCTATTCCT ATCAAACGGC GATAAATAAC GCTATGAGAT TAAGACCTGA TAGATTATTT TTAGGAGAAA TTGATATCAG AAACACCTTT ACATTTTTAA GGGTAAATAA CACAGGACAC GCAGGAAACT TAAGCACTCT GCACGCAAAT AATCCAGAAG ACGCGATCAA AGCTATTATC ACAAATATTA TTTTAGGTGG GGGCTTACAA AACCCTGATA ATAAAATGCT TACTGAACTA ATTATAACGG CTATAGATTT TATTATACAA ATTTCGAGAA ATAAAAAAAC AGGGACTAGA GATATTACAG ATATTTTAGA TTTGAAAAAT GATTACGCAA AATTATTAAT CTAA
|
Protein sequence | MSNNTIVLNN ILNVLKPYLE MEANELIFNK PCEIKVDKGD VWETIYDDRL NYNFLETFLI ELAIKRNQRF DEKHCHLSCE LPYPFLRYRV QAQHKTSLFN SEICICIRIP SKSRFALENF VLNDKCLEKG WTYEKIKDLI KNKKNVLVSG GTGSGKTSFL NSLMGEIDPN ERIVTIEDAQ ELYIENENKT QLAVPKEESE IYSYQTAINN AMRLRPDRLF LGEIDIRNTF TFLRVNNTGH AGNLSTLHAN NPEDAIKAII TNIILGGGLQ NPDNKMLTEL IITAIDFIIQ ISRNKKTGTR DITDILDLKN DYAKLLI
|
| |