Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJJ81176_pVir0002 |
Symbol | |
ID | 4682030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
Kingdom | Bacteria |
Replicon accession | NC_008770 |
Strand | + |
Start bp | 678 |
End bp | 1748 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 639832905 |
Product | VirB9 |
Protein accession | YP_980061 |
Protein GI | 121582659 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGAAAAT ATTCAAAAAT AGCTTTTCTA GCTTTATTTG TAAATTTGAC AGCTTTTGCT GACAACATAC AAATTCAAGA TGTTCCTAAC CCTAATGCAA ACACAGGCGA AAGCATTTTA CAAACTAAGG AACAAGCTTT AAATAATTAT ACACAAACCA ATATCAAAAT AGATCCTTTA GGAAATCAAG GGCAAGGGCA AAGAATAGAT AATTCAAGTT ATGCTAATCC ACAATATCAA GCCCAAGCTT TTGATACTTA CTCTCAAAGC AATGGAGAAC AGTTAAGCGA AGAGCAAATT GCTTTAATGA AAAGTGCGAT TAGAAACCAA AATTTAAATG CTTTACAGCA AAGATTTTTT CAAAAAAAAT ATTCAGGATT TGAAAACACA TTAAATCTTG ATTATCAGCC CAATAAAACG CAAAAAATAA GAACACGCTT TGCAATGGCA ACCACTCTTA TTTTTGAAAC GGATATTACA AATTATATCT TAGGAGATAC GACAGGATTT AAGGTAGAAG AAATTCCAAG TATGCCTAAT GCCATAGCTA TTAAACCTAT GCTAATCGGA ATTGATACTT CTTTGACTAT TTTTACCAAA GACAATAAAC TTCACACCTT CTACATCTTT TCGACTGATT ATAAAAATAG CAAAGATCCT TCTTTAGTAA TTTATATACA CGATCAAAAT TCAAAAGAAT TAATTAAAGA GAAACAAGAA AAATTGGCAA AAGATTACTT AATCATTAAA GAAGGTATTG CTGAAGTTCG TGTTAAAAAA AGTGAAATCT ATAATCACTA TAGCCAAAAA GCAAAAAAAG GCGACGAGTG GCTTATTAGC GAAGAAATTT TCAATGATAA AAAATTTACT TATTTCAAAT ACGACAAAGA CAAAATGCCA CAAGTCCCAG CAATATTTGC AGTAATTGAT AAACAAGACA GTCCAGTAGA GACTAGGATC ATCGGTAATT ATGTAATTGC TGAAACCACT GCAAAAAAAT TTACAATCAA AAGTGGAGAT AGTTATGTAT GTGTAGAGCG TTTGGATCAA AACAAAAAGG CTAAGAAATG A
|
Protein sequence | MRKYSKIAFL ALFVNLTAFA DNIQIQDVPN PNANTGESIL QTKEQALNNY TQTNIKIDPL GNQGQGQRID NSSYANPQYQ AQAFDTYSQS NGEQLSEEQI ALMKSAIRNQ NLNALQQRFF QKKYSGFENT LNLDYQPNKT QKIRTRFAMA TTLIFETDIT NYILGDTTGF KVEEIPSMPN AIAIKPMLIG IDTSLTIFTK DNKLHTFYIF STDYKNSKDP SLVIYIHDQN SKELIKEKQE KLAKDYLIIK EGIAEVRVKK SEIYNHYSQK AKKGDEWLIS EEIFNDKKFT YFKYDKDKMP QVPAIFAVID KQDSPVETRI IGNYVIAETT AKKFTIKSGD SYVCVERLDQ NKKAKK
|
| |