| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJJ81176_1534 |
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| Symbol | |
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| ID | 4682132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008787 |
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| Strand | - |
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| Start bp | 1454125 |
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| End bp | 1457220 |
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| Gene Length | 3096 bp |
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| Protein Length | 1031 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 639854260 |
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| Product | type I restriction-modification enzyme, R subunit |
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| Protein accession | YP_001001189 |
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| Protein GI | 121612641 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0146067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGG CGAAGACTAG TGAGTTTGAT TTAGAGCAGT TTGTTATATC ATCACTACTT
GAGCATGGGT GGTGCTATGA AAAGCCTGTA AGAGCCACTG ATGAAGTTTT GCTAGAAACT
AGCCTTGTAA ATGCACTTTG TAGGCTAAAT CCACAGCTTG ATTTATCAAA AGCTAATGAA
ATTTATAAGG AGCTAAAAAG CAAAAATCAT CTTAGCCTTT TAGATAGCAA TGAAAACTTT
CATTATAAGC TTGTAAATGG GGTAAATATA AACACTACAA AAGACGGCGA AAGCAGAGCT
GATATCATAA ATCTAATTGA TTTTAATAAT GCAAGCAACA ATGAATTTAT AGCAACAAAC
CAGCTAAGCA TCACAGAAGC TAAAGAAAAC AAAATCCCCG ATGTAGTGCT ATATATAAAT
GGAATTCCGC TTGTTTTAAT GGAGCTAAAA AGCCCAAGCG ATGAAAACGC CACGATAAAC
TCAGCTTATA ATCAAATAAA CACTTATAAA CAAACAATCC CAAGTATTTT TACATATAAT
GCTTTTTGTG TGATAAGCGA TGGGTATTTT GCTAGGGCGG GGAGTATTTC GGCTGATTTT
TCAAGGTTTA TGGCGTGGAA AAGTAGCGAT GGGATAAACT ACGCTCCAAA CAAGTCTTTA
GAAATTAAAA CCTTAATAGA TGGTATGCTA AATCCAAAAA CCTTGCTAGA TATCATTTGC
AATTTCATAG TTTTTGAAAA AGAGCAAATA AGAGATTTAA ATGGTATTTT AAGTATAAAA
ACTACCAAAA AAATCGCTTG CTATCATCAA TACTACGCAG TAAATAAAGC CATTAGTAGA
ACAATCACAG CAAGTAGCAA AGACGGAGAT AAAAAAGGTG GCGTGGTGTG GCATACGCAA
GGTAGTGGGA AGTCTTTGTC TATGGTGTTT TATAGTGCTA AAGCGATAAA GGCTTTAAAT
AATCCTACGA TTTTGCTTAT CACGGATAGA AATGATCTAG ATGATCAGCT TTTTGGTACT
TTTGCAAGTT GTGCGAACCT TTTAAGACAA GAGCCAAAAC AAGCAAACGA TAAAGAGCAT
TTAAAAGAGC TTTTAAGGGT AGCTAGTGGT GGAGTGGTAT TTACTACTAT TCAAAAATTT
AGTCCAGAAA ATGATAATGT ATTTGAGTGC TTATCGCTTA GAGATAATAT CATCGTAATT
GCAGATGAAG CACACAGAAC CCAATACGGC TTTGATGCAA AAGTAGTAGA AGAAAAGTCA
AAAAGTGGCG ATGTGCTAGG GCAAAAGATA GTTTATGGTT TCGCAAAATA TCTGCGTGAT
GCTTTGCCAA ATGCTACTTA TATAGGATTT ACAGGAACGC CAATTGAAAG CCATGATATA
AACACCCCTG CAGTTTTTGG AAACTACATA GATATATATG ATATATCAAG AGCTGTTGAA
GATGGTGCTA CTGTGAGTAT ATATTATGAA AGCAGACTTG CCAAAATAGA GCTAAGCGAA
GAAGGAAAAA GGCTTGTAAA TGAATTAGAT GAAAAGCTTG AAAACCAAGA TAGCCAAAAA
GCAAAAGCTA CTAAGCTAGA AGCTTTAGTA GGTAGCACAA GCAGACTAAA ACAAATCGCT
AAAGATATAG TAAAACACTT TGAAACAAGG TCTAGTAAGC TCGGCGGAAA AGGTATGATA
GTAAGTATAA GCCGAAGCGT AGCTATAAAA CTATATGATG AAATCATAAA AATAAGACCA
AGTTGGCATA GCGATGAGCT AAGTAGCGGG GCTATAAAAG TAGTGATGAC TTCAAGCTCT
AGCGATGGGG TAGAGTTTAG TAAACATCAT ACAAGTAAGA TTCAAAAGCA GTTTTTGGCA
AATCGTATGA GAAATATAGA CGATGAATTA AAACTAGTTA TAGTGGTGGA TATGTGGCTA
ACTGGCTTTG ATGTGCCATC GCTTCATACT CTTTATATAG ATAAGCCTAT GAAAGGGCAT
AATCTAATGC AAGCTATAGC TAGAGTAAAT AGGGTTTATA AGGATAAACC TAGTGGGCTT
GTGGTGGATT ATCTTGGGAT TGCAAGTGAT TTGAAAAAAG CTTTATCATT TTATAGTGAA
AGTGGTGGCA AGGGCGATAT AATCACTACT CAAGAAGACG CTGTAAAAGT GATGATAGAA
AAGCTTGAAA TCGTAGAACA AATGCTGCCA AATGACTATG AAAAATACTT TGAACTTGAT
ACGGGGGCTA AACTTGAATA TATACTTGAT GTAGAAGAGC ATATATTATC AAATGAAGAT
GGTAAGAACA GATTTATAAA AGAATTTGCA GCACTTGATA AAGCCTACAC GATAGCTATG
CCACACGAAA AAGCTTTGAG CATAAAGAAT AAAATCGCTT TTATGTATGC GATAAAGGCT
AGGTTTTTAA AGTTTGCTAA AGAAAATGAG AATGAAAATT TGCTTAATCA AGCTTTGATA
AAGCAAGTAG TAGATAAAGC TATTGTATCA TCTAAAGTGG TGGATATTTT TGATGCTAGT
GGTATAAAAA AGCCTGATAT ATCTATACTT TCTGATGAGT TTTTACTAGA AGTAAAGAAT
ATGAAGCGTA AAAATTTAGC CTTTGAAATG CTAAAAAAGA TACTAAATGA TGAGATAAAA
GCAAGAGAAA AGCTAAGCCT AACAAAGGCT AAAAAATTAG CACAAATGCT TAGTGATGCT
ATCAAAAAAT ATAACAATAA GCTAATCTCA TCAAGCGAGG CACTAGATGA GCTAATAAAT
ATGAGTAAAA GCATAGTAAG TATGGAAGAT GAGGCTAAGA AGTTAGGTTT AAAAGACTAT
GAATACGCCT TTTACTCAGC ACTTGCTTGT AATGATGAGT ATGAAAAGAT TTTAGGCAAT
GAAAAACTAT TAGCACTCGT TAGTGAAATA CTGCAAATTA TCAAAAACAA TGTAAGTATA
GACTGGATGA TAAAAGAAAA TGTAAGAGCA AGATTAAGAG TAGCTGTAAA AAGAGTGTTA
AATAAGTATG GTTATCCACC TGATATGCAA CAACTTGCAA TTGATGGAGT TTTAGCTCAA
GCTGAAATTT TGGCTAAGGA ATTAGCTAAC GAGTAG
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| Protein sequence | MSKAKTSEFD LEQFVISSLL EHGWCYEKPV RATDEVLLET SLVNALCRLN PQLDLSKANE
IYKELKSKNH LSLLDSNENF HYKLVNGVNI NTTKDGESRA DIINLIDFNN ASNNEFIATN
QLSITEAKEN KIPDVVLYIN GIPLVLMELK SPSDENATIN SAYNQINTYK QTIPSIFTYN
AFCVISDGYF ARAGSISADF SRFMAWKSSD GINYAPNKSL EIKTLIDGML NPKTLLDIIC
NFIVFEKEQI RDLNGILSIK TTKKIACYHQ YYAVNKAISR TITASSKDGD KKGGVVWHTQ
GSGKSLSMVF YSAKAIKALN NPTILLITDR NDLDDQLFGT FASCANLLRQ EPKQANDKEH
LKELLRVASG GVVFTTIQKF SPENDNVFEC LSLRDNIIVI ADEAHRTQYG FDAKVVEEKS
KSGDVLGQKI VYGFAKYLRD ALPNATYIGF TGTPIESHDI NTPAVFGNYI DIYDISRAVE
DGATVSIYYE SRLAKIELSE EGKRLVNELD EKLENQDSQK AKATKLEALV GSTSRLKQIA
KDIVKHFETR SSKLGGKGMI VSISRSVAIK LYDEIIKIRP SWHSDELSSG AIKVVMTSSS
SDGVEFSKHH TSKIQKQFLA NRMRNIDDEL KLVIVVDMWL TGFDVPSLHT LYIDKPMKGH
NLMQAIARVN RVYKDKPSGL VVDYLGIASD LKKALSFYSE SGGKGDIITT QEDAVKVMIE
KLEIVEQMLP NDYEKYFELD TGAKLEYILD VEEHILSNED GKNRFIKEFA ALDKAYTIAM
PHEKALSIKN KIAFMYAIKA RFLKFAKENE NENLLNQALI KQVVDKAIVS SKVVDIFDAS
GIKKPDISIL SDEFLLEVKN MKRKNLAFEM LKKILNDEIK AREKLSLTKA KKLAQMLSDA
IKKYNNKLIS SSEALDELIN MSKSIVSMED EAKKLGLKDY EYAFYSALAC NDEYEKILGN
EKLLALVSEI LQIIKNNVSI DWMIKENVRA RLRVAVKRVL NKYGYPPDMQ QLAIDGVLAQ
AEILAKELAN E
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