Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJJ81176_1194 |
Symbol | fliR |
ID | 4683183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
Kingdom | Bacteria |
Replicon accession | NC_008787 |
Strand | - |
Start bp | 1107976 |
End bp | 1108743 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 639853920 |
Product | flagellar biosynthesis protein FliR |
Protein accession | YP_001000854 |
Protein GI | 121612403 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.894574 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTTG TTAATTATTT AGGTGATAAA AATGTTGTAA CTTTTATGTT GCTTCTTGCT AGAATGAGTG GTCTTATAGT TTTTTTTCCT TTTTTTTCAC ATAATTCTAT TCCTATGGTG ATAAAAAGTA CTATAGTTTT ATTTTTGACT ATGTATTTAT ATCCTTTGGC TAGATTAGAA TCTTTGCATT TAGATAGTTT TTTTGTTTTA CAGCTTATTA GTGAAGTGAT TTTTGGAATG ATAGCAGGAT TAATGCTTCA AATTATTTTT GCTATTATTA TGATGGCAGG TGAGCAGATT GCTTTTACTA TGGGATTTAC TATGGCAAGT ATATTAGATC CAAGTTCTGG AACGAGTATG CCTATCACAT CTCAAATTTT AAATTTACTT GCTTTGATGT TTTTTCTTGC TTTTGATGGC CATCATTTAA TGCTTTTGTT TTTAAGTCAT TCTTTGGGTT ATATTAGTTT AGGTGGATTT TATCCGCATG AGAATTTAAT GCATTATTTA AATATGGGTA TGTTTAATAT TTTCATCATA GGTTTTACTA TGAGCTTTCC TATACTTGGA ATTTCACTTT TAGCCGATGT TATTTTTGGA CTTTTGATGA AAACAATGCC ACAATTTAAT CTTTTAGTTA TTGGCTATCC TATAAAGATA GCTCTAGGTT TTGTAGTTTT GATTGCTATT TTACTAGTTA TGATGCAATA TTTTAAAAAT TTAATTTTAG AACTTTTTAC TCATATGCAA ACTCTTTTTT TCTCCTAA
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Protein sequence | MEFVNYLGDK NVVTFMLLLA RMSGLIVFFP FFSHNSIPMV IKSTIVLFLT MYLYPLARLE SLHLDSFFVL QLISEVIFGM IAGLMLQIIF AIIMMAGEQI AFTMGFTMAS ILDPSSGTSM PITSQILNLL ALMFFLAFDG HHLMLLFLSH SLGYISLGGF YPHENLMHYL NMGMFNIFII GFTMSFPILG ISLLADVIFG LLMKTMPQFN LLVIGYPIKI ALGFVVLIAI LLVMMQYFKN LILELFTHMQ TLFFS
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