| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJJ81176_1152 |
|---|
| Symbol | |
|---|
| ID | 4683581 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008787 |
|---|
| Strand | + |
|---|
| Start bp | 1070680 |
|---|
| End bp | 1072227 |
|---|
| Gene Length | 1548 bp |
|---|
| Protein Length | 515 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 26% |
|---|
| IMG OID | 639853878 |
|---|
| Product | lipooligosaccharide biosynthesis glycosyltransferase, putative |
|---|
| Protein accession | YP_001000812 |
|---|
| Protein GI | 121613734 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis
[COG1216] Predicted glycosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.000783621 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTAA AGCAAATAAG CGTTATTATC ATCGTAAAAA ATGCTGAGCA AACTTTGCTT
GAGTGTTTAA ATTCTTTAAA AGATTTTGAT GAAATTATTT TACTTAACAA TGAAAGCATT
GATAATACCC TAAATATAGC TAATGAATTT AAAAAAGATT TTGCTAATTT ATATATTTAT
CACAATGCTT TTATAGGTTT TGGAGCTTTA AAAAATCTTG CCTTAAGCTA TGCAAAAAAT
GATTGGATTT TAAGCATTGA TGCTGATGAA GTACTTGAAA ATGAGTGTAT TAAAGAGCTT
AAAAATTTAG AACTTCAAGA AGATAATATC ATCGCACTTA GTCGGAAAAA TCTCTATAAA
GGCGAATGGA TAAAGGCTTG TGGTTGGTCG CCTGATTATG TTTTAAGAAT TTTTAATAAA
AATTTCACTC GTTTTAATGA TAATTTAGTG CATGAAAGCC TTGTTTTACC AAGTAATGTT
AAAAAAATTC ATCTTAAAAA TGGATTGAAG CATTATGCTT TTAGAGATAT TTCTCACTTA
ATCAATAAAA TGCAGTACTA CTCAAGCCTT TGGGCAAAAC AAAATATACA TAAAAAAAGT
GGTGTTTTAA AAGCAAATTT AAGAGCTTTT TGGACTTTTT TTAGAAATTA TTTTTTAAAA
AATGGCTTTT TGTATGGTTA TCAAGGCTTT ACGATCAGCG TTTGCAATGC CTTAGGGACT
TTTTTTAAAT ATATGAAATT ATATGAACTT CAAAAGCAAA AGCCAAAAAC TTGTGCTTTA
ATAATAACAA CCTATAATCA AAAAGAACGC CTTAAATTAG TGCTTGATAG TGTTAAAAAT
CTAACCTTTT TACCCAATGA AGTTTTAATC GCAGATGATG GTAGCAAAGA AGATACAGCA
AGGCTTATTG AAGAATATCA AAAAGATTTT CCTTGCTCTT TAAAACACAT TTGGCAAGAA
GATGAGGGTT TTCGCGCTGC AAAAAATAGA AATAATGCCA TTAGAGTTTC TAAAAGTGAA
TATATAATTT TAATTGACGG TGATATGATT TTAGAAAAAG ACTTTATAAA AAATCATTTC
GAATTTGCGA AACGCAAAGT AATTTTACAA GGTTCAAGAG TAATTTTAAA TAAAAATGAA
AGCGAAGAAA TCTTAAAAAA TGATGATTAT AGTTTAGCTT TTAGTAAAAA AGATTTTAAA
AGCTATAAAA ATTCTTTTTT AGCCAAAATT ATCTATAAAA TTTCAAAAAT AGATCAAAAA
TTTTTTAATA CCAAAGAAAT AATAAAGGGA AGTAAAACCT GCAATATGAG TTTTTTTAAA
GCCGATTTTG ATGAACTTGA TGGTTTTAAT GAAAATTTTA TTGGTTGGGG TAGAGAAGAT
AGTGAATTTG TGGCTAGATT TTTATTTAAT AAAGGCATTT TTAGACGCTT AAAATTTAAA
GCTATTGCTT ATCATATTTA TCATGAAGAA AATAGCAAAA AAATGCTCGA AAGCAATCAT
CAAATTTATT TAGATACCAT CAAAAATAAA AAAATTTCTT GGAGATAA
|
|---|
| Protein sequence | MNLKQISVII IVKNAEQTLL ECLNSLKDFD EIILLNNESI DNTLNIANEF KKDFANLYIY
HNAFIGFGAL KNLALSYAKN DWILSIDADE VLENECIKEL KNLELQEDNI IALSRKNLYK
GEWIKACGWS PDYVLRIFNK NFTRFNDNLV HESLVLPSNV KKIHLKNGLK HYAFRDISHL
INKMQYYSSL WAKQNIHKKS GVLKANLRAF WTFFRNYFLK NGFLYGYQGF TISVCNALGT
FFKYMKLYEL QKQKPKTCAL IITTYNQKER LKLVLDSVKN LTFLPNEVLI ADDGSKEDTA
RLIEEYQKDF PCSLKHIWQE DEGFRAAKNR NNAIRVSKSE YIILIDGDMI LEKDFIKNHF
EFAKRKVILQ GSRVILNKNE SEEILKNDDY SLAFSKKDFK SYKNSFLAKI IYKISKIDQK
FFNTKEIIKG SKTCNMSFFK ADFDELDGFN ENFIGWGRED SEFVARFLFN KGIFRRLKFK
AIAYHIYHEE NSKKMLESNH QIYLDTIKNK KISWR
|
|---|
| |