Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJJ81176_0866 |
Symbol | |
ID | 4683201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
Kingdom | Bacteria |
Replicon accession | NC_008787 |
Strand | - |
Start bp | 797335 |
End bp | 798522 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 639853589 |
Product | major facilitator family protein |
Protein accession | YP_001000534 |
Protein GI | 121612847 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00300213 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCCAA AAAAAATTAT TAAATCAATG ACAGCACTTT TTGCTGGTAT GGCATTTTTA TTTGCAGGTA ATGCCTTGAT GGTAAGCTCT ATAGGTGTTA TATTAAAAGA AAACGGAGAA AGTTCTTTAG CTGTTGGAGT AGTAAGTTCT TGTTTTTTTG TAGGTGCTCT TGTTGGAACT ATCAGTGCTC ATAAAATTAT TTCTCGTATA GGTCATATAC GCTCTTTTGG GCTATTTGGT GCTATTTTTG GAATTTCAGC TATGCTTCAT ACAGTAAGCG AAAATCTTAT TTTTTGGGCT ATTTTAAGAT TTTTCATAGG AATTTGCTAC TATGGACTTT TAATGGTCAT AGAATCATGG CTTAATGAAA AAAGCAAAAA TACCATTCGA TCTAGAATTT TAGGCTTTTA TGAAATTGTT TTTTATCTTG CGTTTGGTAT TGGAGTTTTA ATCATAGCGT TAAATTTGAG CAAACATAGT GTATTTATTC TCAGTGCAAC TTTAATTTTA CTTTCATCTT TACCTTTAAA TCTAATTAAA ATCAAAGAAC CTGTTTTACC CGCATCAAGT CCTATTTCTA TACCTAAAAT TTTTGATATA GCTCCTTTAG CTATCGTCAC AAGCTTTATA GCTGGAATGC TTATAAATGG CTTTTTTTCT ATGGCATCTT TATTTATACT TTTGCAAGGT TTTGATACAA AAGCGGTTTC TTATTTTATA TTTTGTGGGG TTTTAGGTGG TTTTATTGCA CAAACCATCA TAGGAACTAT TTCAGATAAA CTTGGTCGCA AATTTGCCAT TATCACTTGT GCAAGCATAG GATTTATCAC TATGCTTATA TTTATCTTTT TTAAACTTCA CTTGTATATG CAATATTTTT TAGGAATTAC TCTTGGTATA GGAATATTTT GTTTATATGC TTTAGCACTT GCTAGAGCAA ATGATGTTTT AGTAAACAAA AATAAAGGTG TAGAGTTAGG TCGTGGGGTT CTTTTTTGTT ATTCTTTGGG CTCTTTGTTT GGCCCTTTAA TTTTAGGTTT TTTAATGCAA TATTTTGAAA TCAAAGGTTT TATATGGTTT TATATAATTT CTTTAGCATT TTTAATTCTT TTTGCTATCA ATAAACCAAA TATTTTAAAT AAAAAATTTA AGAAAAAGCC TGGAAATATG GTGATATTTG ATGATTAA
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Protein sequence | MSPKKIIKSM TALFAGMAFL FAGNALMVSS IGVILKENGE SSLAVGVVSS CFFVGALVGT ISAHKIISRI GHIRSFGLFG AIFGISAMLH TVSENLIFWA ILRFFIGICY YGLLMVIESW LNEKSKNTIR SRILGFYEIV FYLAFGIGVL IIALNLSKHS VFILSATLIL LSSLPLNLIK IKEPVLPASS PISIPKIFDI APLAIVTSFI AGMLINGFFS MASLFILLQG FDTKAVSYFI FCGVLGGFIA QTIIGTISDK LGRKFAIITC ASIGFITMLI FIFFKLHLYM QYFLGITLGI GIFCLYALAL ARANDVLVNK NKGVELGRGV LFCYSLGSLF GPLILGFLMQ YFEIKGFIWF YIISLAFLIL FAINKPNILN KKFKKKPGNM VIFDD
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