| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJJ81176_0673 |
|---|
| Symbol | |
|---|
| ID | 4682722 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008787 |
|---|
| Strand | + |
|---|
| Start bp | 600758 |
|---|
| End bp | 601876 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 639853396 |
|---|
| Product | membrane-bound lytic murein transglycosylase D, putative |
|---|
| Protein accession | YP_001000346 |
|---|
| Protein GI | 121612334 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TTTTATTGTG TTTTTTAATA TGTTTTAATT TTCTTTTTGC GCAAATTAAT
ACTCCTGAAT TTTATGAAAG ACAAATGAAT GTTTTAAGAA ATTTAGATAT TAATCCAAGT
TTTATTAGTG ATTTGATTTT TGTGCAAACT CAACAAGATA TAAAATCAAA ACATGCTCAA
ACTTTAATAG ATAGTATGCA AAATTTTTCA AAAGTTACTC CTATGATAAG AAAAATTTTA
GCCCAGCAGG AAGTTCCTGA TGAGATTTTG TATCTAGCTA TGGTTGAATC AGGCTTGAAA
ACTCATAGTG TTTCTAATGC CAAGGCTGTA GGGGTTTGGC AATTTATGCA ACCAACAGCT
AGAAATTTGG GTTTAAGAAT CGATGCTTAT GTTGATGAAA GGCGTGATCC GGTCAAGTCA
ACTTATGCCG CTACAAATTA TTTAAAAGAG TTAAAAGAAG AATTTGGCAA ATGGTATTTA
GCACTTTTAG CTTATAATTG CGGAAATGGC AAGCTAAGAC AAGTTATCAA GCAAGCAGGA
AGTGATGATT TAAGTGTTTT ATTGAACCCT GATAAGAAAT ATCTTTCTTT AGAAACTAGA
AATTTTATAA GAAAGATTTT AACGCTTGCT TTTTTAGCTA ATGATAGGGA TTTTTTACTA
GATAAAGATG CGTCTTTAAT GAATTATGCT TTAAGCAATG AATTTGCAAA AGTTGATGTG
CCTTCTTCTG CATCTTTAAA AGAAATAGCT AAAAATTTAA ATATGGATCT TGCAACCTTT
AAGAAATATA ATCCACAATT TAAACATAAT TTTACGCCTC CTGGTAAAGG GTATTATATG
TATATACCAC TTAATAAAGT AGCATTTTTT GATAAAAATT TTAAAGCAGA AAAACTTGCG
AAGGTTGATA CAACTATACC TATGACAAGA ACTTATACCG TTAAGTCTGG TGACTCTTTA
TATAAAATAG CAAAAAATTA TAATATAAGT GTTGATGAAA TTCGAGAATT CAATAAAATA
GCAAAAAATC ATCTTAGCAT TAATCAAAAA TTAATTATAC CAATCAAGGA GAATAAAAAT
GCAAATAAAA ACAATTACAC TAAAGTTGTC AGCCGTTAG
|
|---|
| Protein sequence | MKKILLCFLI CFNFLFAQIN TPEFYERQMN VLRNLDINPS FISDLIFVQT QQDIKSKHAQ
TLIDSMQNFS KVTPMIRKIL AQQEVPDEIL YLAMVESGLK THSVSNAKAV GVWQFMQPTA
RNLGLRIDAY VDERRDPVKS TYAATNYLKE LKEEFGKWYL ALLAYNCGNG KLRQVIKQAG
SDDLSVLLNP DKKYLSLETR NFIRKILTLA FLANDRDFLL DKDASLMNYA LSNEFAKVDV
PSSASLKEIA KNLNMDLATF KKYNPQFKHN FTPPGKGYYM YIPLNKVAFF DKNFKAEKLA
KVDTTIPMTR TYTVKSGDSL YKIAKNYNIS VDEIREFNKI AKNHLSINQK LIIPIKENKN
ANKNNYTKVV SR
|
|---|
| |