| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJJ81176_0585 |
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| Symbol | |
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| ID | 4682423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008787 |
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| Strand | + |
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| Start bp | 520003 |
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| End bp | 521331 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 639853308 |
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| Product | MATE efflux family protein, authentic frameshift |
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| Protein accession | YP_001000260 |
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| Protein GI | 121612390 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.636807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAGTA TTTTTAGCAC CTTAAGCCCT TTTAGGCTTT TTGTAAAATG TGCCGTGCCA
AATGTTATAA GCATGGCTTT TATTTCTTTT TATTATATAG TTGATGGAAT TTTTGTTGGA
AAATATCTAG GAAGTGATGC TTTAGCGGCA CTAGCCTTGA TTATTCCCTT TATCATGATG
TCTTTTGCTT TGGCTGATAT GATAGCCATA GGATCAGCAG TGCAAATTTC TATGCATTTA
GGTTTAGGCA AGAAGAATTT AACTAGAAAG ATATTTAGCT CAAGTATGTT GATTATCTTT
ATAATCTCTT GTTTTATCGG AATTTTGGAG TATTTTTTAG GACCTGTTTT GATTGATTGT
TTAAATGTTA GCGATGAGAT TAAAACGATG ACTAAAGAAT GTATGTTTGT TTTTGCTTTG
TTTGCACCCT TTACTATGCT TTCTTTTGCT TTGGATAATT ATTTAAGAAT TTGCGGAAAA
ACTGCTTATA GTATGGTAAT GAATGTGATT ATAGCATTAA GCAATATAGT GCTTGATTAT
ATTTTTATAG TCGAGTTGGG TTGGGGCTTA TTTTCAGCTG CTCTTGCAAC TTGTTTGGGA
CTTGTTTTAG GTGGTATTTT TGGAATTTTT CCTTTCTTGT TTCAAAATTT AGAGCTTAAA
ATTTCGAGCC TATATATGAA TTTAAAAATT TTTAAAAATA TTCTTTATAA CGGAAGCAGT
GAGTTTTTTG GCAATATTTC AGGATCTTTG TATAGTATTT TTGCAAATTT TGTTTTATTA
AAAATTTCTG ATACTCAAGC CGTGGCAGCC TTTTCTATAG TTTTATATAT TGATAGTTTT
ATTATAATGC TTATTATTGC TATAGGTGAT GCAATGCAGC CTGCGCTTAG TTACAACTAT
GCTAAAAAAG ATTTTTCAAG AATCAAAGCT ATTATAAAAG TGGTATTTTT TGCAGGGGGA
TTTTTATCTT TATTCTCTAT AGTGCTTATA TTGATATTTG GAGAAAATTT AATCACGCTT
TTTACAAAAG AAAACAATCA AGAATTTAAA ACTTTTGCTT ATACAGCTTT GATGCTTTTT
GCTTTTAATT ATTTTTTTGC ATGGTTTAAT GTTCTAAGTG GTTCTTTTTT GACAGCTTTT
AATAAGGCAA GCTTTTCTTT GGTTTTAAGT TTGGCGCAAA ATTTATTTAT ACCTTTGTTT
TTTCTTTTGT TTTTATCTTG TTTTATGGGT TTAAATGGAG TATGGCTAAG TCCATTTTTT
GCTGAATTTT GTGTTTTGAT TTTAGCTTGG ATTTTTCTTA AAAGAATTTT TAAAGATCTA
TCTTTATAG
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| Protein sequence | MSSIFSTLSP FRLFVKCAVP NVISMAFISF YYIVDGIFVG KYLGSDALAA LALIIPFIMM
SFALADMIAI GSAVQISMHL GLGKKNLTRK IFSSSMLIIF IISCFIGILE YFLGPVLIDC
LNVSDEIKTM TKECMFVFAL FAPFTMLSFA LDNYLRICGK TAYSMVMNVI IALSNIVLDY
IFIVELGWGL FSAALATCLG LVLGGIFGIF PFLFQNLELK ISSLYMNLKI FKNILYNGSS
EFFGNISGSL YSIFANFVLL KISDTQAVAA FSIVLYIDSF IIMLIIAIGD AMQPALSYNY
AKKDFSRIKA IIKVVFFAGG FLSLFSIVLI LIFGENLITL FTKENNQEFK TFAYTALMLF
AFNYFFAWFN VLSGSFLTAF NKASFSLVLS LAQNLFIPLF FLLFLSCFMG LNGVWLSPFF
AEFCVLILAW IFLKRIFKDL SL
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