Gene CJJ81176_0476 details

Gene Information

• Locus tag: CJJ81176_0476
• Symbol: rpe
• ID: 4682769
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter jejuni subsp. jejuni 81-176
• Kingdom: Bacteria
• Replicon accession: NC_008787
• Strand: +
• Start bp: 418657
• End bp: 419304
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 639853200
• Product: ribulose-phosphate 3-epimerase
• Protein accession: YP_001000158
• Protein GI: 121612304
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0036] Pentose-5-phosphate-3-epimerase
• TIGRFAM ID: [TIGR01163] ribulose-phosphate 3-epimerase

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 0.774232
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATGTAG CTCCAAGTTT ATTGTCTGCA AATTTTTTAA AATTAGAAGA AGAAGTTAAA 
GCTATTGAAG CTGCAGGTGC AGATCTTTTA CATATTGATG TAATGGATGG ACACTTTGTT 
CCAAATTTGA CTTTTGGACC TTGCGTGATC GAAAAAATTT CAACTATTAG TAAGTTGCCA 
TTAGATGTGC ATTTGATGGT TAAAGATGTA AGTAAATTTA TAGATCTTTT TATCCCTTTG 
AAACCAAAAT TTATTTCTTT TCATATAGAA AGCGAAGTTC ATCCTATAAG ACTTTGTGAA 
TATATAAGAA GTCAAGGAAT CCATCCTGCT ATTGTTTTAA ATCCACACAC TTCTATTGAT 
TCTATTAAAC ACATGCTAGA ATTTGTAGAT ATGGTACTTT TAATGAGTGT TAATCCTGGA 
TTTGGTGGAC AAAAATTTTT ACCTTTGGTA CATGAAAAAA TCAAAGAATT GCGCCAAATG 
ATTGATAAAA AAAATGCTAA AGTTTTTATA GAGGTTGATG GTGGTGTTAA TGGTTTAAAT 
GCTAGCGATT TAGAAGAATC CGGAGCTGAT ATTTTGGTGG CTGGAAGTTA TATTTTTTCT 
TCTAATGATT ATAAAACTGC AATTTCATCT TTAAAGCTTG AATTTTGA 

 

Protein sequence

MYVAPSLLSA NFLKLEEEVK AIEAAGADLL HIDVMDGHFV PNLTFGPCVI EKISTISKLP 
LDVHLMVKDV SKFIDLFIPL KPKFISFHIE SEVHPIRLCE YIRSQGIHPA IVLNPHTSID 
SIKHMLEFVD MVLLMSVNPG FGGQKFLPLV HEKIKELRQM IDKKNAKVFI EVDGGVNGLN 
ASDLEESGAD ILVAGSYIFS SNDYKTAISS LKLEF