| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJJ81176_0389 |
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| Symbol | cmeB |
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| ID | 4682137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008787 |
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| Strand | - |
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| Start bp | 336608 |
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| End bp | 339730 |
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| Gene Length | 3123 bp |
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| Protein Length | 1040 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 639853114 |
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| Product | RND efflux system, inner membrane transporter CmeB |
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| Protein accession | YP_001000077 |
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| Protein GI | 121612937 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTCTA AATTTTTTAT CGAAAGACCT GTTTTTGCTT CAGTTGTTGC AATTATCATT
TCTTTAGCTG GAGCCATAGG TCTTACAAAT TTACCTATAG AACAATATCC TTCTTTAACC
CCTCCTACAG TTAAAGTAAG TGCAACTTAC ACAGGAGCTG ATGCACAAAC CATTGCTTCA
ACAGTTGCAA GTCCTATCGA AGATGCAATC AATGGCGCAG ATAATATGAT TTACATGGAT
TCAACTTCAA GTTCTTCAGG AACTATGAGT TTGACTGTTT ATTTTGATAT CGGTACAGAT
CCTGATCAAG CCACCATAGA TGTTAATAAT AGAATTTCAG CCGCAACTGC AAAAATGCCA
GATGCAGTTA AAAAACTTGG AGTAACAGTT AGAAAAACTT CCTCAACAAC ACTTGCTGCA
ATTTCTATGT ATTCAAGTGA TGGCTCAATG AGTGCAGTAG ATGTATATAA CTATATCACT
TTAAATGTTT TAGATGAGTT AAAAAGGGTT CCAGGAGTTG GAGATGCAAA CGCTATAGGA
AATCGTAATT ATTCTTTAAG AATTTGGCTC AAGCCTGATT TATTAAATAA ATTTGGAATC
ACAGCTACTG ATGTAATTTC TGCGGTTAAT GACCAAAATG CCCAATACGC AACTGGTAAA
ATTGGCGAAG AACCTGTAAC CCAAAAATCC CCTTATGTTT ATTCAATCAC TATGCAAGGA
AGACTACAAA ATCCTAGTGA ATTTGAAAAC ATTATTTTAA GAACAAATAA TGATGGATCA
TTTTTAAGAC TTAAAGATGT AGCTGATGTG GAAATAGGAT CACAACAATA CAGCTCACAA
GGACGATTAA ATGGCAATGA TGCAGTTCCA ATTATGATTA ATCTTCAATC AGGGGCAAAC
GCATTGCATA CAGCAGAACT TGTTCAAGCT AAAATGCAAG AACTTTCAAA AAATTTTCCA
AAAGGTTTAA CATATAAAAT TCCTTACGAT ACAACAAAAT TTGTAATAGA ATCAATCAAA
GAAGTTGTTA AAACTTTTGT TGAAGCTCTA ATTTTAGTTA TCATTGTTAT GTATATGTTC
TTAAAGAATT TCCGTGCAAC ACTTATTCCT ATGATAGCTG TACCTGTTTC ATTGTTAGGA
ACTTTTGCTG GACTTTATGT TTTAGGTTTT AGTATTAACT TGCTTACGCT TTTTGCTTTA
ATTTTAGCCA TAGGGATCGT TGTAGATGAT GCGATTATAG TTGTAGAAAA TATTGATAGG
ATTTTACATG AAAATGAGCA AATAAGCGTA AAAGATGCTG CTATCCAAGC GATGCAAGAA
GTTAGCTCTC CGGTTATTTC AATTGTTCTT GTGCTTTGTG CTGTTTTTGT ACCAGTTTCT
TTTATATCAG GTTTTGTTGG AGAGATTCAA AGACAATTTG CTCTTACCTT AGCTATATCT
GTAACCATAT CAGGTTTTGT TGCTCTTACC TTAACACCTT CTTTATGTGC ACTCTTTTTG
CGACGCAATG AAGGAGAGCC ATTTAAATTT GTAAAGAAAT TTAATGATTT TTTTGATTGG
AGTACCTCTG TATTTAGCGC AGGAGTAGCA TATATCCTAA AAAGAACCAT TCGTTTTGTT
TTAATTTTTT GTATTATGCT TGGAGCAATT TTTTATCTCT ATAAAGCAGT ACCAAATTCT
TTAGTTCCTG AAGAAGATCA AGGTTTGATG ATTAGCATTA TTAATCTTCC TTCAGCTTCA
GCACTCCATA GAACAATTTC AGAGGTTGAT CACATAAGCC AAGAAGTTTT AAAAACTAAT
GGAGTTAAAG ATGCAATGGC TATGATAGGA TTTGATCTTT TTACAAGTTC ACTCAAAGAA
AATGCCGCTG CAATGTTTAT AGGTTTGCAA GATTGGAAAG ATAGAAATGT AAGCGCTGAT
CAAATTATAG CCGAACTTAA TAAAAAATTT GCTTTTGATC GCAATGCTTC AAGTGTATTT
ATAGGCTTAC CTCCCATACC TGGATTAAGT ATCACAGGCG GTTTTGAAAT GTATGTTCAA
AACAAAAGCG GAAAAAGCTA TGATGAAATA CAAAAAGATG TAAATAAACT TGTTGCTGCG
GCCAACCAAA GAAAAGAACT ATCAAGAGTA AGAACAACAC TTGATACAAC TTTCCCTCAA
TACAAGCTTA TAATTGATAG AGATAAATTA AAACACTACA ATCTTAACAT GCAAGATGTT
TTTAACACGA TGAATGCAAC TATAGGCACT TATTATGTTA ATGATTTTTC TATGCTAGGT
AAAAACTTCC AAGTAAATAT CCGCGCAAAA GGTGATTTTA GAAATACACA AGATGCATTA
AAAAATATTT TTGTAAGATC AAATGATGGA AAAATGATAC CACTTGATTC TTTCTTAACT
TTACAAAGAA GTTCAGGGCC TGATGATGTA AAACGATTCA ACCTTTTCCC AGCGGCACAA
GTTCAAGGTC AACCCGCACC AGGTTATACT TCAGGTCAAG CTATAGAAGC GATTGCTCAA
GTAGCAAAAG AAACTTTAGG GGATGATTAT TCCATAGCTT GGAGTGGATC AGCTTATCAA
GAAGTTTCTA GTAAAGGAAC AGCAAGCTAT GCTTTTGCTT TAGGTATGAT ATTTGTCTTT
TTAATTCTAG CTGCCCAATA TGAAAGATGG CTTATACCTT TAGCAGTTGT AACAGCTGTA
CCTTTTGCGG TATTTGGATC ATTTTTATTG GTATATTTAA GGGGATTTAG CAATGACATA
TATTTTCAAA CAGGACTTTT GCTCTTGATT GGACTTTCAG CTAAAAATGC TATCTTAATC
GTAGAATTTG CAATGGAAGA GCGCTTTAAA AAAGGCAAAG GAGTTTTTGA AGCAGCTGTT
GCAGCAGCAA AACTTCGTTT TCGTCCTATC ATAATGACTT CTTTGGCATT TACTTTTGGG
GTCTTGCCAA TGATTTTCGC AACAGGAGCA GGAAGTGCTT CAAGACACTC TTTAGGAACA
GGGCTTATTG GTGGAATGAT CGCAGCATCA ACTTTAGCGA TATTCTTTGT GCCTTTATTT
TTCTATCTTT TAGAAAATTT TAATGAATGG CTAGATAAAA AAAGAGGTAA GGTTCATGAA
TAA
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| Protein sequence | MFSKFFIERP VFASVVAIII SLAGAIGLTN LPIEQYPSLT PPTVKVSATY TGADAQTIAS
TVASPIEDAI NGADNMIYMD STSSSSGTMS LTVYFDIGTD PDQATIDVNN RISAATAKMP
DAVKKLGVTV RKTSSTTLAA ISMYSSDGSM SAVDVYNYIT LNVLDELKRV PGVGDANAIG
NRNYSLRIWL KPDLLNKFGI TATDVISAVN DQNAQYATGK IGEEPVTQKS PYVYSITMQG
RLQNPSEFEN IILRTNNDGS FLRLKDVADV EIGSQQYSSQ GRLNGNDAVP IMINLQSGAN
ALHTAELVQA KMQELSKNFP KGLTYKIPYD TTKFVIESIK EVVKTFVEAL ILVIIVMYMF
LKNFRATLIP MIAVPVSLLG TFAGLYVLGF SINLLTLFAL ILAIGIVVDD AIIVVENIDR
ILHENEQISV KDAAIQAMQE VSSPVISIVL VLCAVFVPVS FISGFVGEIQ RQFALTLAIS
VTISGFVALT LTPSLCALFL RRNEGEPFKF VKKFNDFFDW STSVFSAGVA YILKRTIRFV
LIFCIMLGAI FYLYKAVPNS LVPEEDQGLM ISIINLPSAS ALHRTISEVD HISQEVLKTN
GVKDAMAMIG FDLFTSSLKE NAAAMFIGLQ DWKDRNVSAD QIIAELNKKF AFDRNASSVF
IGLPPIPGLS ITGGFEMYVQ NKSGKSYDEI QKDVNKLVAA ANQRKELSRV RTTLDTTFPQ
YKLIIDRDKL KHYNLNMQDV FNTMNATIGT YYVNDFSMLG KNFQVNIRAK GDFRNTQDAL
KNIFVRSNDG KMIPLDSFLT LQRSSGPDDV KRFNLFPAAQ VQGQPAPGYT SGQAIEAIAQ
VAKETLGDDY SIAWSGSAYQ EVSSKGTASY AFALGMIFVF LILAAQYERW LIPLAVVTAV
PFAVFGSFLL VYLRGFSNDI YFQTGLLLLI GLSAKNAILI VEFAMEERFK KGKGVFEAAV
AAAKLRFRPI IMTSLAFTFG VLPMIFATGA GSASRHSLGT GLIGGMIAAS TLAIFFVPLF
FYLLENFNEW LDKKRGKVHE
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