| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJJ81176_0388 |
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| Symbol | cmeC |
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| ID | 4683000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008787 |
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| Strand | - |
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| Start bp | 335137 |
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| End bp | 336615 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 639853113 |
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| Product | RND efflux system, outer membrane lipoprotein CmeC |
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| Protein accession | YP_001000076 |
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| Protein GI | 121612467 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAA TAATTTCAAT TAGTGCTATA GCAAGTTTTA CTCTTTTGAT TTCAGCTTGC
TCTTTAAGTC CAAATTTAAA TATTCCCGAA GCAAACTATA GCATTGATAA TAAGCTTGGA
GCCTTATCTT GGGAAAAAGA AAACAATAGC TCTATCACAA AAAATTGGTG GAAAGACTTT
GATGATGAAA ATTTAAATAA AGTGGTTGAT TTAGCACTTA AAAATAATAA TGATTTAAAA
CTTGCTTTCA TACACATGGA ACAAGCTGCT GCTCAATTAG GTATAGATTT TAGCAGTTTG
TTGCCAAAAT TTGATGGTAG CGCAAGCGGA AGTCGTGCAA AAACAGCTAT AAATGCTCCA
AGCAATCGAA CTGGGGAAGT AAGTTACGGT AATGATTTTA AAATGGGACT TAATTTAAGC
TATGAAATCG ATCTTTGGGG AAAATATCGC GATACATATC GCGCCTCAAA ATCAGGCTTT
AAAGCAAGTG AGTATGATTA TGAAGCTGCA AGACTTTCTG TTATTTCAAA TACAGTTCAA
ACTTATTTTA ATCTTGTAAA TGCTTATGAA AATGAAAATG CTCTTAAAGA AGCTTATGAA
TCTGCAAAAG AAATTTATAG GATTAATGAT GAAAAATTTC AAGTTGGCGC TGTAGGTGAA
TATGAACTTG CTCAAGCAAG AGCCAACTTA GAAAGTATGG CTTTGCAATA TAATGAAGCA
AAGTTAAATA AAGAAAATTA CCTTAAAGCT TTAAAAATTT TAACTTCAAA TGATTTAAAT
GACATACTTT ACAAAAATCA AAGCTATCAA GTTTTTAATC TTAAAGAATT TGACATTCCA
ACTGGAATTT CAAGTACCAT CTTGCTTCAA CGTCCAGATA TTGGCTCTTC TTTAGAAAAA
TTAACTCAGC AAAATTATCT TGTTGGAGTA GCTCGCACGG CTTTCTTACC TAGCCTTTCT
TTAACAGGAT TATTGGGATT TGAAAGCGGG GATTTAGATA CCTTGGTTAA AGGAGGTTCT
AAGACTTGGA ATATAGGTGG AAACTTTACT CTGCCTATTT TTCATTGGGG TGAAATTTAC
CAAAATGTAA ATTTAGCCAA GCTTAATAAA GATGAAGCTT TTGTAAATTA TCAAAATACT
TTGATTACTG CTTTTGGAGA AATTCGCTAT GCTTTAGTAG CTAGAAAAAC TATACGCTTA
CAATACGATA ATGCACAAGC AAGCGAACAA TCTTACAAAA GAATCTATGA AATTGCTAAA
GAACGCTATG ATATAGGAGA AATGTCTTTG CAAGATTATT TAGAGGCACG TCAAAATTGG
CTTAATGCTG CGGTTGCTTT TAATAATATT AAATATTCTT ATGCCAATTC CATAGTAGAT
GTAATCAAAG CATTTGGTGG AGGATTTGAG CAAAGTGAAG ATACGAGTAA AAATATAAAA
GAAGAATCAA AAAATTTAGA TATGTCTTTT AGAGAATAG
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| Protein sequence | MNKIISISAI ASFTLLISAC SLSPNLNIPE ANYSIDNKLG ALSWEKENNS SITKNWWKDF
DDENLNKVVD LALKNNNDLK LAFIHMEQAA AQLGIDFSSL LPKFDGSASG SRAKTAINAP
SNRTGEVSYG NDFKMGLNLS YEIDLWGKYR DTYRASKSGF KASEYDYEAA RLSVISNTVQ
TYFNLVNAYE NENALKEAYE SAKEIYRIND EKFQVGAVGE YELAQARANL ESMALQYNEA
KLNKENYLKA LKILTSNDLN DILYKNQSYQ VFNLKEFDIP TGISSTILLQ RPDIGSSLEK
LTQQNYLVGV ARTAFLPSLS LTGLLGFESG DLDTLVKGGS KTWNIGGNFT LPIFHWGEIY
QNVNLAKLNK DEAFVNYQNT LITAFGEIRY ALVARKTIRL QYDNAQASEQ SYKRIYEIAK
ERYDIGEMSL QDYLEARQNW LNAAVAFNNI KYSYANSIVD VIKAFGGGFE QSEDTSKNIK
EESKNLDMSF RE
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