| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJJ81176_0106 |
|---|
| Symbol | sppA |
|---|
| ID | 4682283 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008787 |
|---|
| Strand | + |
|---|
| Start bp | 91688 |
|---|
| End bp | 92584 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 639852830 |
|---|
| Product | signal peptide peptidase SppA, 36K type |
|---|
| Protein accession | YP_999794 |
|---|
| Protein GI | 121613641 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
|---|
| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATTT TAAAATCATT TTTTAAGGCT TTAGGATGTG GTATAAAATT TATCAATACT
TATTTTAAAA CCTTTGTTTT ATTGTTGATT GTTATATGGA TTTTAATGCC TAGTGCAAAT
TCAAGCTCTA ATCTTGCAAA TTTAGAACGC ATTGATTTAA AGGGTGAAAT TTTTGATAGC
TCTGCGGTTT TGGAAAAAAT TATCAATGCT AAAAATGATA GCAATATCAA AGGAGTGCTT
TTTGTTATAG ACTCTCCTGG TGGAGCTTTT GCTCCTAGTA TGGAACTAGC TCTAGCTATA
AAGGATTTAA AAATTAAAAA GCCTGTGCTT GTTTATGCAA GCGGAACTAT GGCAAGTGGA
AGTTATTTAG CAGGAGTTGG AGCAAATAAA ATTTTAGCCA ATCCGGCAAG TTTTATAGGC
TCTATCGGTG TGATTATGCA AGGAGCTGAT TTAAGTGGAT TGGCTAATAA ACTCGGTATT
AAAGAACAAA CTATTCAAGC GGGTGAATTT AAAAGTGCTG GAACTTTTGC AAGAGCTTGG
AATGAGAATG AAAGAAATTT TTTACAGGGT TTAATTGATC AAAGTTATGA TCTTTTTACA
GGTTTTGTTG CCAAGGAAAG AGCATTAGAT CTTAATAAAA AAGATCAATG GGCAAATGCA
AGAGTGTTTT TAGCTGCCAA GGCTAAGGAG CTTGGTCTTA TAGATGAGCT TAGTAATTAT
GAAAATGCTA AAAAGGAGCT TGAAAAACTT GCTAATGTTT CAAATCCTGT TTGGAAAGAA
GAAGATAAGA TTGATAAATT TCTTAACCGC CTAGAAGGAC AAACATCAAG CTTGATAAGT
AAAAGCTTAA TCGAAATCGT TTATAAAACT AATAGCAGTT TTATAAGCGC TAGATAA
|
|---|
| Protein sequence | MQILKSFFKA LGCGIKFINT YFKTFVLLLI VIWILMPSAN SSSNLANLER IDLKGEIFDS
SAVLEKIINA KNDSNIKGVL FVIDSPGGAF APSMELALAI KDLKIKKPVL VYASGTMASG
SYLAGVGANK ILANPASFIG SIGVIMQGAD LSGLANKLGI KEQTIQAGEF KSAGTFARAW
NENERNFLQG LIDQSYDLFT GFVAKERALD LNKKDQWANA RVFLAAKAKE LGLIDELSNY
ENAKKELEKL ANVSNPVWKE EDKIDKFLNR LEGQTSSLIS KSLIEIVYKT NSSFISAR
|
|---|
| |