| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJJ81176_0003 |
|---|
| Symbol | |
|---|
| ID | 4682146 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008787 |
|---|
| Strand | - |
|---|
| Start bp | 1595507 |
|---|
| End bp | 1596268 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 639854433 |
|---|
| Product | RNA pseudouridine synthase family protein |
|---|
| Protein accession | YP_001001353 |
|---|
| Protein GI | 121612851 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
|---|
| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000000522631 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATTA ATAAATTTAT ATCCCATAAC ACTCGTTATT CACGCCGTGA AGCTGATGAA
CTTATCAAAC AAGGCTTAGT AAAAATAAAC AACAAAATTG CCCTTTTAAG CGATGAAGTT
AAATTTGATG ATAAAGTCTT TGTTAAGGGC AAAAGAGTGC AAAAAAGAAC GCAATTTAGC
GTGATAATCT ACCATAAACA AAAAGGTGAA ATTGTCAGTA AAAAAGACGA TCGTGGAAGA
AAAACTATAT ACGATACCTT GCCAAGACAA TTTAGTACTT GGCTTAGCGT AGGTAGGCTG
GATTATGCAA GCGAGGGCTT GCTTTTGCTT ACAGATTCTC CTGTGATTGC TAATGCTTTA
ATGCATAGCG ATTTAGAAAG AGAATACTAC CTTAAAGTTA AAGGTACGGT GAGCAAACAA
GTCATCGAAG CCATGCAAAA TGGGCTTGAG ATTAAAAATG AAAAAAAAGG CGCACACGCA
AAAACCAAAA TCACCTCTAT GAGTTTTGCT CCTTTTATAG ACTTTGAAAT TTTTGGATCA
AGTGGAGGTT ATACTAAGCT TAGAGTGGTT ATAAATGAAG GTAAAAATAG AGAGCTTAGA
CGCTTTTTTG GACATTTTGA TCTTGAAGTC ATGGATCTTA AGCGTGTTGC TTTTGGGGCT
TTAGATCTTG GTATGTTAAA GGCGGGAAAA CATCGCTATT TGGAAAATGG AGAATATGAA
AAATTAAGAG ATTTTTTGAA ATTTAATGAA ATAAGATATT GA
|
|---|
| Protein sequence | MRINKFISHN TRYSRREADE LIKQGLVKIN NKIALLSDEV KFDDKVFVKG KRVQKRTQFS
VIIYHKQKGE IVSKKDDRGR KTIYDTLPRQ FSTWLSVGRL DYASEGLLLL TDSPVIANAL
MHSDLEREYY LKVKGTVSKQ VIEAMQNGLE IKNEKKGAHA KTKITSMSFA PFIDFEIFGS
SGGYTKLRVV INEGKNRELR RFFGHFDLEV MDLKRVAFGA LDLGMLKAGK HRYLENGEYE
KLRDFLKFNE IRY
|
|---|
| |