Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJE1363 |
Symbol | htrA |
ID | 3231869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni RM1221 |
Kingdom | Bacteria |
Replicon accession | NC_003912 |
Strand | - |
Start bp | 1277039 |
End bp | 1278457 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637292717 |
Product | protease DO |
Protein accession | YP_179350 |
Protein GI | 57238100 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA TTTTTTTATC ATTAAGTTTA GCAAGTGCTT TATTTGCTGC AAGTATTAAT TTTAACGAAT CGACTGCAAC GGCTAATCGT GTGAATCCTG CTGCTGGAAA TGCAGTGCTT TCTTATCATG ATTCTATTAA AGATGCAAAA AAATCAGTGG TTAATATTTC CACCTCAAAA ACTATTACAA GAGCAAATCG TCCAAGCCCT TTGGATGATT TTTTTAATGA TCCTTATTTT AAACAATTTT TTGATTTTGA TTTTCCTCAA AGAAAAGGAA AAAATGATAA AGAAGTGGTG AGTTCTTTGG GATCAGGGGT GATTATTTCA AAAGATGGTT ATATAGTAAC AAATAATCAC GTTGTAGATG ATGCTGATAC GATTACAGTG AATTTACCAG GAAGCGACAT AGAATATAAA GCAAAACTTA TAGGTAAAGA TCCAAAAACA GATTTGGCTG TTATAAAAAT AGAGGCTAAT AATCTTTCAG CTATTACTTT TACAAATTCT GATGATTTAA TGGAAGGAGA TGTTGTTTTT GCACTTGGAA ATCCTTTTGG AGTTGGTTTT AGTGTTACAA GTGGGATAAT ATCTGCTTTA AATAAAGACA ATATAGGTTT AAATCAATAT GAAAATTTTA TACAAACAGA TGCTTCTATC AATCCAGGAA ATTCAGGTGG AGCTTTGGTG GATAGTCGCG GATATTTAGT AGGTATTAAT TCAGCTATTC TTTCTCGTGG TGGTGGAAAT AACGGCATAG GTTTTGCCAT ACCTTCAAAT ATGGTTAAAG ATATAGCTAA AAAACTTATT GAAAAAGGCA AGATTGATAG AGGATTTTTA GGTGTGACTA TTTTAGCTTT GCAAGGTGAT ACTAAAAAAG CTTACAAAAA TCAAGAAGGA GCTTTAATCA CTGATGTTCA AAAAGGTTCA AGTGCTGATG AAGCAGGGCT TAAGCGTGGA GATTTAGTTA CTAAAGTTAA TGATAAGGTT ATAAAAAGTC CTATTGATCT TAAAAATTAT ATAGGAACTT TAGAGATTGG TCAAAAAATT TCATTAAGTT ACGAAAGAGA TGGAGAAAAT AAGCAAGCAA GTTTTATTCT TAAAGGTGAA AAAGAAAATC CTAAAGGCGT ACAAAGCGAT TTGATTGATG GTTTGAGTTT GAGAAATTTA GATCCAAGAC TTAAGGATCG TTTGCAAATT CCAAAAGATG TTAATGGTGT TTTGGTTGAT AGTGTTAAAG AAAAGAGCAA AGGAAAAAAT TCTGGTTTCC AAGAGGGTGA TATTATCATA GGTGTTGGAC AAAGTGAAAT TAAAAATTTA AAAGATTTAG AACAAGCTTT AAAACAAGTT AATAAAAAAG AATTTACCAA AGTTTGGGTA TATCGCAATG GTTTTGCGAC TTTGCTTGTG CTTAAATAA
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Protein sequence | MKKIFLSLSL ASALFAASIN FNESTATANR VNPAAGNAVL SYHDSIKDAK KSVVNISTSK TITRANRPSP LDDFFNDPYF KQFFDFDFPQ RKGKNDKEVV SSLGSGVIIS KDGYIVTNNH VVDDADTITV NLPGSDIEYK AKLIGKDPKT DLAVIKIEAN NLSAITFTNS DDLMEGDVVF ALGNPFGVGF SVTSGIISAL NKDNIGLNQY ENFIQTDASI NPGNSGGALV DSRGYLVGIN SAILSRGGGN NGIGFAIPSN MVKDIAKKLI EKGKIDRGFL GVTILALQGD TKKAYKNQEG ALITDVQKGS SADEAGLKRG DLVTKVNDKV IKSPIDLKNY IGTLEIGQKI SLSYERDGEN KQASFILKGE KENPKGVQSD LIDGLSLRNL DPRLKDRLQI PKDVNGVLVD SVKEKSKGKN SGFQEGDIII GVGQSEIKNL KDLEQALKQV NKKEFTKVWV YRNGFATLLV LK
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