Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJE1332 |
Symbol | luxS |
ID | 3231839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni RM1221 |
Kingdom | Bacteria |
Replicon accession | NC_003912 |
Strand | + |
Start bp | 1248216 |
End bp | 1248710 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637292685 |
Product | S-ribosylhomocysteinase |
Protein accession | YP_179319 |
Protein GI | 57238070 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1854] LuxS protein involved in autoinducer AI2 synthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCATTAT TAGACAGCTT TAAAGTTGAC CATACTAAAA TGCCAGCTCC TGCTGTGCGT TTAGCTAAAG TTATGAAAAC ACCTAAGGGT GATGATATTA GCGTGTTTGA TTTGCGTTTT TGCATACCAA ATAAAGACAT TATGAGCGAA AAAGGTACTC ATACCTTAGA ACATTTATTT GCAGGATTTA TGAGAGATCA TCTTAATTCA AATTCAGTTG AAATTATTGA TATTTCACCT ATGGGTTGTC GCACGGGTTT TTATATGAGT TTAATTGGAA CACCAGATGA AAAAAGTGTT GCAAAAGCTT GGGAAGAAGC TATGAAAGAT GTTTTAAGCG TAAGCGATCA AAGCAAAATT CCTGAACTTA ATATCTATCA ATGCGGAACT TGCGCAATGC ATTCTTTAGA TGAAGCCAAA CAAATTGCCC AAAAGGTTTT AAATCTAGGT ATTAGCATAA TGAATAACAA AGAATTAAAA CTCGAGAATG CTTAA
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Protein sequence | MPLLDSFKVD HTKMPAPAVR LAKVMKTPKG DDISVFDLRF CIPNKDIMSE KGTHTLEHLF AGFMRDHLNS NSVEIIDISP MGCRTGFYMS LIGTPDEKSV AKAWEEAMKD VLSVSDQSKI PELNIYQCGT CAMHSLDEAK QIAQKVLNLG ISIMNNKELK LENA
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