Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJE1265 |
Symbol | pglD |
ID | 3231772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni RM1221 |
Kingdom | Bacteria |
Replicon accession | NC_003912 |
Strand | - |
Start bp | 1181410 |
End bp | 1182021 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637292619 |
Product | general glycosylation pathway protein |
Protein accession | YP_179253 |
Protein GI | 57238004 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
TIGRFAM ID | [TIGR03570] sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.333754 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTACAAC AGAGAAATTT AATGGCAAGA ACTGAAAAAA TTTATATTTA TGGTGCTAGT GGTCATGGAC TTGTTTGTGA AGATGTGGCT AAAAATATGG GTTATAAAGA ATGTATTTTT TTAGATGATT TTAAAGGAAT GAAATTTGAA AGTACCTTAC CTAAATATGA TTTTTTTATA GCCATAGGAA ACAATGAAAT TCGAAAAAAG ATTTATCAAA AAATTTCAGA AAATGGCTTT AAAATTGTCA ATCTTATCCA TAAAAGTGCA CTTATAAGTC CTAGCGCAAT CGTGGAAGAA AGTGCAGGAA TTTTAATCAT GCCTTATGTA GTGATTAACG CTAAAGCTAA AATAGAAAAA GGTGTGATTT TAAATACTTC AAGCGTAATT GAGCATGAAT GTGTGATAGG GGAATTTTCT CATGTGAGTG TGGGAGCTAA ATGTGCGGGT AACGTAAAAA TTGGTAAAAA TTGTTTTTTA GGGATTAATT CTTGTGTTTT GCCTAATTTA AGTTTGGCAG ATGATAGTAT TTTAGGTGGT GGAGCAACTT TAGTTAAAAA TCAAGATGAA AAAGGTGTTT TTGTGGGAGT ACCTGCAAAA AGAAAAATAT GA
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Protein sequence | MLQQRNLMAR TEKIYIYGAS GHGLVCEDVA KNMGYKECIF LDDFKGMKFE STLPKYDFFI AIGNNEIRKK IYQKISENGF KIVNLIHKSA LISPSAIVEE SAGILIMPYV VINAKAKIEK GVILNTSSVI EHECVIGEFS HVSVGAKCAG NVKIGKNCFL GINSCVLPNL SLADDSILGG GATLVKNQDE KGVFVGVPAK RKI
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