Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJE1087 |
Symbol | |
ID | 3231596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni RM1221 |
Kingdom | Bacteria |
Replicon accession | NC_003912 |
Strand | - |
Start bp | 1014980 |
End bp | 1016551 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 637292445 |
Product | mechanosensitive ion channel family protein |
Protein accession | YP_179080 |
Protein GI | 57237832 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0312609 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAA TTATTATTTT AACCTTTTTT GTTGTTTTTG CTTTTGGTGA TGTAAATCGG ACTATTATTA ATAATATAAA TGAGAAAATT AATACTTTAA ATACTGTAAT CAGTGCTAGT ATTTGGAATA TACGTTATGA AAATTTTATA AAATATCAAG ATATAAATGA TGAATTAATC ATTTTAAATC TTAATTTAAA AAAGACTTCC GATATTCACC AACAAGAAGA ACTTAAACGC AAGATAGCAA ATTTAGAAGA GCAATTGAAC TTGCTTAAAG AATATAAAGA TTTAAATTTT GCACAAAGTC TTAGTGCCCC TGATAATATA GAAACTTTAT CTAAGCTTAC TAATCCTTTG GCTATTATAG GAGCTTTTTC TCATATTAAG AAATTAAAAG GAGAAAAGGA AGAGTATATA TTTAAATTTA ATGATTTTAA AAATTTAGTA GATAAAATCA GGGAAAAAAA TTCAGAACTT AAGGAATTAG TTGAGCTTAA ACCAAGTGTT GAGAATATAG AAGCTTTAAA AGCTTCGGAT AAAAAGCTGG AAGAATTTGA GCAAGCTTTA AATTTTGCTA GTGTTTCTTA TTCTGTTTAT GAGAAAAAAA TTGATGAAGA GCTTTCTCGA GTAAGTGCTG AGATTAAAGT TCAAAGCTTA AGGGCTGTAA ATATACTTGT TGCTATTGTT ATTGTTATAG CTATAGCTTT TATGTTGAAA TTTATTGCTA AAAAATACAT TAAAGATAGT GAAAGATATT ATACTGCTAC GAAGATTATT AATTTTATTA ATATAAATAT TATTTTTCTT ATTTTGCTCT TTGCTTATAT AGAAAATATT ACTTATCTTG TAACTATACT TGGTTTTGCT TCTGCAGGCT TAGCTATTGC TATGAAAGAT ATGTTTATGT CTATGCTTGG ATGGTGTGTG ATTATTTTTG GCGGAAGTTT TAGAGTAGGG GATCGTGTAA AAGTTTTTCA AAATGATACT ACCTATATAG GAGATATTAT AGATATTTCT TTTTTACGCG TTACTCTTTA TGAAGAACTT ACGCTTGAAA CTTATAGTAA AAATCGTCGT AGTGGACGTA TTATATTTAT TCCTAATAAC TATGTTTTTA CAAATTTGCT TGCTAATTAT ACTCATCATG GTATGAAAAC CGTGCTTGAT GGCATTGATA TAAGTGTTAC TTTTGATAGC AATCTTGATA AGGCACAAGA AATTGTGGAA AATATTGTTA CACGCCATGC CAAAGGTTAT ACTGAGCTTG CTAGAAAAAA TATAGCTCGT TTACAACATG AATATAGTAT TAAAAATCCT AAAGTGGAGC CAAGGTTTTT TATGTTTTTT GAACATTGGG GAATGCGAAT TTCTGCATGG TATATGACTA ATGCTTATGC GGCTTTGGTA TTAAGAAGTA CGATTAGCAA AGAGATTATA AAAGAATTTA ATAAGCATAA AGATATAAAA ATTGCTTATC CATCGCAAAA TTTATATTTA GGAAATTTAA ATCAAAATCA TTTTGAACAA CATCATGAAA ATATGTATTT TCATGCAAGG AATAAGGATT GA
|
Protein sequence | MKKIIILTFF VVFAFGDVNR TIINNINEKI NTLNTVISAS IWNIRYENFI KYQDINDELI ILNLNLKKTS DIHQQEELKR KIANLEEQLN LLKEYKDLNF AQSLSAPDNI ETLSKLTNPL AIIGAFSHIK KLKGEKEEYI FKFNDFKNLV DKIREKNSEL KELVELKPSV ENIEALKASD KKLEEFEQAL NFASVSYSVY EKKIDEELSR VSAEIKVQSL RAVNILVAIV IVIAIAFMLK FIAKKYIKDS ERYYTATKII NFININIIFL ILLFAYIENI TYLVTILGFA SAGLAIAMKD MFMSMLGWCV IIFGGSFRVG DRVKVFQNDT TYIGDIIDIS FLRVTLYEEL TLETYSKNRR SGRIIFIPNN YVFTNLLANY THHGMKTVLD GIDISVTFDS NLDKAQEIVE NIVTRHAKGY TELARKNIAR LQHEYSIKNP KVEPRFFMFF EHWGMRISAW YMTNAYAALV LRSTISKEII KEFNKHKDIK IAYPSQNLYL GNLNQNHFEQ HHENMYFHAR NKD
|
| |