Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJE0709 |
Symbol | |
ID | 3231969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni RM1221 |
Kingdom | Bacteria |
Replicon accession | NC_003912 |
Strand | + |
Start bp | 640816 |
End bp | 641988 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637292072 |
Product | macrolide-specific efflux protein macA |
Protein accession | YP_178721 |
Protein GI | 57238198 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA AGATTGTTTT AATCATTTTA ATTGCAATAC TTGGAAGTGT TGGGGCTTAT TTTATTTTTT TTAATAATGA TGAAAAAATC AGCTATTTAA CTCAAAAAAT ACAAAAAAAA GATATATCTC AAACCATAGA GGCAGTAGGA AAGGTATATG CCAAAGATCA AGTCGATGTG GGTGCTCAAG TTAGTGGACA AATTATAAAA CTTTATGTTG ATGTGGGAAC TCATGTAAAG CAAGGTGATT TGATCGCTCA AATTGATAAA GATAAACAAC AAAACGATTT AGATATTACA AAAGCTCAGC TTGAAAGTGC TAAGGCTAAT TTAGAGAGTA AAAAAGTTGC CCTTGAGATT GCGAATAAGC AATATCAAAG AGAGCAAAAA CTTTATGCAG CTAAAGCAAG TTCTCTTGAA AATTTAGAAA CTCAAAAAAA TAATTATTAT ACTTTAAAAG CCAATGTTGC AGAGCTTAAT GCTCAAGTAG TTCAGCTTGA AATCACTCTT AAAAATGCAC AAAAAGATTT AGGTTATACA ACCATTACTG CTCCTATGGA TGGTGTTGTG ATTAATGTAG CTGTAGATGA AGGACAAACA GTTAATGCTA ATCAAAACAC TCCTACTATA GTCCGTATAG CTAATTTAGA CGAAATGGAA GTAAGAATGG AAATAGCAGA GGCTGATGTG AGTAAGATAA AAGTAGGAAC AGAGCTTGAT TTTTCTTTGC TTAATGATCC TCAAAAAACT TATCATGCTA AGATTGCAAG TATAGATCCA GCTGATACTG AAGTGAGTGA TTCTAGTACA AGCTCAAGCT CATCAAGTTC GAGTTCTTCA AGCTCAAGCT CATCAAATGC TATTTATTAT TACGCAAAAT TTTATGTAGC CAATAAAGAT GATTTTTTGC GTATTGGTAT GAGTATACAA AATGAAATTG TCGTAGCAAG TGCAAAGGCT GTTTTAGCAG TGCCAACTTA TGCAATTAAA AGCGATCCAA AAGGCTATTA TGTTGAAATT TTGGAAAATC AAAAAGCTGT TAAAAAATAT GTCAAACTTG GCATTAAAGA TTCTATCAAT ACTCAAATTT TAGAAGGTGT AAATGAAGAT GAAGAATTGA TAGTAAGCTC AAGTGCTGAT GGTTTAGCTC CTAAAATGAA GTTGAGATTT TAA
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Protein sequence | MKKKIVLIIL IAILGSVGAY FIFFNNDEKI SYLTQKIQKK DISQTIEAVG KVYAKDQVDV GAQVSGQIIK LYVDVGTHVK QGDLIAQIDK DKQQNDLDIT KAQLESAKAN LESKKVALEI ANKQYQREQK LYAAKASSLE NLETQKNNYY TLKANVAELN AQVVQLEITL KNAQKDLGYT TITAPMDGVV INVAVDEGQT VNANQNTPTI VRIANLDEME VRMEIAEADV SKIKVGTELD FSLLNDPQKT YHAKIASIDP ADTEVSDSST SSSSSSSSSS SSSSSNAIYY YAKFYVANKD DFLRIGMSIQ NEIVVASAKA VLAVPTYAIK SDPKGYYVEI LENQKAVKKY VKLGIKDSIN TQILEGVNED EELIVSSSAD GLAPKMKLRF
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