Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJE0450 |
Symbol | lysS |
ID | 3231212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni RM1221 |
Kingdom | Bacteria |
Replicon accession | NC_003912 |
Strand | + |
Start bp | 403402 |
End bp | 404907 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637291808 |
Product | lysyl-tRNA synthetase |
Protein accession | YP_178469 |
Protein GI | 57237456 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00462] lysyl-tRNA synthetase-like protein GenX [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTGATA ATATTTTAGA GCAGCAAAGA ATAGAAAAAG CTAAAGAGTT AAAAAATTTA GGGATTAATC CTTATCCTCA TTTTTTAGAA AAGGAAATGT CTTTAAAGAC TTTTAAGGAT AGATTTTCTT ATATTTTAGA GCAAGTTGAA AAAAGAGATG AAAGTGTCAA TGCTGTTGTT GCAGGACGTT TGAAACTTTT GCGTATAGCT GGGAAATCAA TTTTTGCAAA CATTGAAGAT GAGGATACAA ATTTACAAAT TTATTTTAGT AAAGATAGCG TAGGCGAAGA GCTTTATACG ATTTTAAAAA AGAATTTAGA GGTGGGTGAT ATTGTTTTGG TTAAAGGTTT TCCTTTTGTA ACTAAAACAG GTGAGTTTAG TTTGCATGCA AGTGAAGTAA AACTCGCTAC AAAAGCTATT GTTCCTTTAC CTGAAAAATA TCATGGATTA ACAGATATTG AACAAAGATA TCGTAAACGT TATGTTGATA TGATAATGAA TGCAGAAGTT AGAAAAGATT TTTTAGTGCG TTCTAAAGTG GTGAGTTTGA TTCGTCATTT TTTTGAAAAT AAAGGCTTTT TAGAAGTAGA AACTCCTATG ATGCATCCGA TTGCAGGTGG AGCAAACGCT AAGCCTTTTG TAACTTTTCA CAATTCTTTA GGCGTAGAAA GATTTTTAAG AATTGCTCCA GAACTTTATC TTAAAAGACT TGTAGTGGGT GGTTTTGAGG CAGTTTTTGA AATCAATCGT TGTTTTAGAA ACGAAGGTAT GGATTTAACT CATAATCCCG AATTTACAAC TATAGAATTT TATTGGGCTT ATCATAATTA TAAAGATTTA ATGGATTTAA CTGAAGAACT TTTTGCTTTG CTTTTAGATA AACTTAATTT GGGAAAAACA ATAGAATTTG ATGGAAAAAT GATAGATTTT TCTAAACCTT TTGAAAGAAT AACCTATAAA GATGCACTTT GTAAGTATGG TGGTTTAGAT AGGGATTTAA TCGAAGATAA GGAAAAAATT CTTACTAAAT TAAAAGCAGA TGGTTTTGAA GCGAATGAAA AGCTTGAACT TGGACATTTG CAAGCTGAAC TTTTTGACAA TTATGTGGAA GAAAAATTGA TCAATCCTAC TTTTGTGATT GATTTTCCTA TTTCCATAAG TCCTTTATCA AGACGTAGCG ATGAGGATTC TCAGATTGCT GAGAGATTTG AGTTGTTTAT TTGTGGAAGA GAATTGGCAA ATGGTTTTAA TGAGCTTAAT GATCCTCTTG ATCAATATGA GAGATTTTTA AAACAAATTG AAGCTAAAAA TGCAGGCGAT GAAGAGGCTT GCGAAATGGA TGAAGATTTT GTAAATGCTT TGGGTTATGG AATGCCTCCA ACGGCAGGGC AGGGTATAGG CATAGATAGA CTTGTTATGC TTTTGACAAA TAAAAAATCT ATTCGAGATG TGATATTGTT TCCTGCAATG CGTCCATTAA AATCAGAACT AAAGGAGAAA GAATGA
|
Protein sequence | MFDNILEQQR IEKAKELKNL GINPYPHFLE KEMSLKTFKD RFSYILEQVE KRDESVNAVV AGRLKLLRIA GKSIFANIED EDTNLQIYFS KDSVGEELYT ILKKNLEVGD IVLVKGFPFV TKTGEFSLHA SEVKLATKAI VPLPEKYHGL TDIEQRYRKR YVDMIMNAEV RKDFLVRSKV VSLIRHFFEN KGFLEVETPM MHPIAGGANA KPFVTFHNSL GVERFLRIAP ELYLKRLVVG GFEAVFEINR CFRNEGMDLT HNPEFTTIEF YWAYHNYKDL MDLTEELFAL LLDKLNLGKT IEFDGKMIDF SKPFERITYK DALCKYGGLD RDLIEDKEKI LTKLKADGFE ANEKLELGHL QAELFDNYVE EKLINPTFVI DFPISISPLS RRSDEDSQIA ERFELFICGR ELANGFNELN DPLDQYERFL KQIEAKNAGD EEACEMDEDF VNALGYGMPP TAGQGIGIDR LVMLLTNKKS IRDVILFPAM RPLKSELKEK E
|
| |