Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3831 |
Symbol | |
ID | 4183503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 4417147 |
End bp | 4417845 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638073817 |
Product | hypothetical protein |
Protein accession | YP_680406 |
Protein GI | 110640196 |
COG category | [R] General function prediction only |
COG ID | [COG2738] Predicted Zn-dependent protease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTTCG TTATTGCGAT TGTAACCATG CTCGCGAGCT GGTATGTAAG TAATAAGTTA AAGCGTAAAT TTGAAGAATA TTCCAGATAT GAACTTCTAT CGGGAATGTC GGGGAAAGAA GTGGCGGAAC AAATGCTGCG TGACAACAGG ATTTATGATG TAAAAGTCAT TTCTGTTGAA GGCAGGCTTA CGGACCACTA CAATCCGGCT GACAAAACAG TAAATTTAAG TACGGATGTA TATAACGGCC GCAGCGCTGC TTCGGCTGCC GTTGCTGCAC ACGAATGCGG CCACGCATTA CAGCATGCAC AGGCATACAG CATGCTTGAA CTTCGTTCAA CATTAGTGCC TGTGCAAAAC ATCAGCGCTG GCATTTTAAA TGTGTTAATG ATGGTAATGA TCTTTGGTGG TATGTTTCTG GTTGGTCCGC AAACGTTACC TTATGTTTTA CTGATCATCA TTGCATGTAA CTTAATACTT ACCGTGTTTG CCCTTATTAC ATTACCGGTA GAATTTGATG CCAGTAACCG TGCACTGGCC TGGATGGAGT CCCGTGGTGT TACAAATACA GAAGAACACG CGATGGCAAA AGATGCTTTA AAATGGGCTG CCAGAACATA CGTTGTAGTT GCGGTTGGTG CATTTGCACA ATTGCTGTAT TATGTAATGA TGTTTTTAGG CATGAGCAGA GATGACTAA
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Protein sequence | MIFVIAIVTM LASWYVSNKL KRKFEEYSRY ELLSGMSGKE VAEQMLRDNR IYDVKVISVE GRLTDHYNPA DKTVNLSTDV YNGRSAASAA VAAHECGHAL QHAQAYSMLE LRSTLVPVQN ISAGILNVLM MVMIFGGMFL VGPQTLPYVL LIIIACNLIL TVFALITLPV EFDASNRALA WMESRGVTNT EEHAMAKDAL KWAARTYVVV AVGAFAQLLY YVMMFLGMSR DD
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