Gene CHU_3831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3831 
Symbol 
ID4183503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4417147 
End bp4417845 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content43% 
IMG OID638073817 
Producthypothetical protein 
Protein accessionYP_680406 
Protein GI110640196 
COG category[R] General function prediction only 
COG ID[COG2738] Predicted Zn-dependent protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTCG TTATTGCGAT TGTAACCATG CTCGCGAGCT GGTATGTAAG TAATAAGTTA 
AAGCGTAAAT TTGAAGAATA TTCCAGATAT GAACTTCTAT CGGGAATGTC GGGGAAAGAA
GTGGCGGAAC AAATGCTGCG TGACAACAGG ATTTATGATG TAAAAGTCAT TTCTGTTGAA
GGCAGGCTTA CGGACCACTA CAATCCGGCT GACAAAACAG TAAATTTAAG TACGGATGTA
TATAACGGCC GCAGCGCTGC TTCGGCTGCC GTTGCTGCAC ACGAATGCGG CCACGCATTA
CAGCATGCAC AGGCATACAG CATGCTTGAA CTTCGTTCAA CATTAGTGCC TGTGCAAAAC
ATCAGCGCTG GCATTTTAAA TGTGTTAATG ATGGTAATGA TCTTTGGTGG TATGTTTCTG
GTTGGTCCGC AAACGTTACC TTATGTTTTA CTGATCATCA TTGCATGTAA CTTAATACTT
ACCGTGTTTG CCCTTATTAC ATTACCGGTA GAATTTGATG CCAGTAACCG TGCACTGGCC
TGGATGGAGT CCCGTGGTGT TACAAATACA GAAGAACACG CGATGGCAAA AGATGCTTTA
AAATGGGCTG CCAGAACATA CGTTGTAGTT GCGGTTGGTG CATTTGCACA ATTGCTGTAT
TATGTAATGA TGTTTTTAGG CATGAGCAGA GATGACTAA
 
Protein sequence
MIFVIAIVTM LASWYVSNKL KRKFEEYSRY ELLSGMSGKE VAEQMLRDNR IYDVKVISVE 
GRLTDHYNPA DKTVNLSTDV YNGRSAASAA VAAHECGHAL QHAQAYSMLE LRSTLVPVQN
ISAGILNVLM MVMIFGGMFL VGPQTLPYVL LIIIACNLIL TVFALITLPV EFDASNRALA
WMESRGVTNT EEHAMAKDAL KWAARTYVVV AVGAFAQLLY YVMMFLGMSR DD